Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01203 ATGCTGGTAGTGATCTGTTATGGGTTCCATGTGATTGCATACAGTGCGCTCCCTTGTCTGCCAGTTACTATGCCCCTCTGGTGCTCCCTCATGTTTGGGGCATCTATTATGCAGGATAGAGATCTGAATGAGTATAGTCCTTCTCGTTCAAGATCCAGCAAGCCTCTGTCTTGCAGCCATCAGTTATGTGATCCGGGTTCAAACTGTAAGAGTTCCAAGCAGCAGTGTCCATACACAATCAATTACGTATCAGAAAATACATCGAGTTCTGGATTGTTGGTTGAGGACATATTGCATCTTCAATCAGGAGGTGGTGGTAGTGCTGGCGGATCTAACACTTCTGTTCAGGCTTCGGTTGTTATCGGGTGTGGTATGAAGCAGAGTGGCGGGTATTTAGATGGGATAGCTCCGGATGGCCTCATGGGTTTGGGACCTGGGGAGAGTTCAGTTCCAAGTATTCTTGCAAAATCAGGACTAATCCATGATTCTTTTTCCTTATGTTTTAATTCTGATGGTTCTGGTCGCATGTTTTTTGGGGACCAGGGATCATCCATCCAACAACAGTCTACTTCATTCTTGCCATTCGATGGAATATATTCAACCTACATTATTGGAGTGGAGACATGTTGTATTGGGAATTCTTGTCTCAAAATGACAAGTTTTAAAGCACAGGTTGATAGTGGAACATCATTTACATTTCTTCCTGGGCATGTGTATGAATCCATAGCAGAGGAGTTTGATAAAAAGCTAAATGCCTCAAGAGCTACCTTCAAAGATACTCCCTGGGAGTATTGTTATGCTTCTAGTTCACAAGACTTGCCAAAGATTCCCACCTTAACACTCATGTTCCAGCAGAATAACAGCTTTGTGGTCTATAATCCTGTGTTTGTATTCAATGTCGATCAGAAAACAACTGCATTTTGTTTAGCCATAGAGCCAGCTGAAGGGGATATGGGAACAATAGGACAGAACTTCATGACGGGATATCGGTTGGTATTTGATCAAGAAAACAAGAAGTTAGCATGGTCACGGTCAAATTGTAAGGATCTCAATCTAGGTAAGGCAATGCCCCTTTCGCCTCCAAACGAGACAGCCTCGAACCCATTACCGGCAGATGAGCAGCAGAGAACTAAGGGGAATGCGGTTGCCCCAGCTGTTGCCGGAACAGCTCCTCGCAAACCTTCTGGTGCTACGTCTTTGACGATTTCATGCCGGCATCATTGGCACTGTTATTTGTTTCTTCTATTCCAACTTCTAGTAGCCTTCTTATGA 1272 0.441 MLVVICYGFHVIAYSALPCLPVTMPLWCSLMFGASIMQDRDLNEYSPSRSRSSKPLSCSHQLCDPGSNCKSSKQQCPYTINYVSENTSSSGLLVEDILHLQSGGGGSAGGSNTSVQASVVIGCGMKQSGGYLDGIAPDGLMGLGPGESSVPSILAKSGLIHDSFSLCFNSDGSGRMFFGDQGSSIQQQSTSFLPFDGIYSTYIIGVETCCIGNSCLKMTSFKAQVDSGTSFTFLPGHVYESIAEEFDKKLNASRATFKDTPWEYCYASSSQDLPKIPTLTLMFQQNNSFVVYNPVFVFNVDQKTTAFCLAIEPAEGDMGTIGQNFMTGYRLVFDQENKKLAWSRSNCKDLNLGKAMPLSPPNETASNPLPADEQQRTKGNAVAPAVAGTAPRKPSGATSLTISCRHHWHCYLFLLFQLLVAFL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01203 423 FunFam Aspartyl protease family protein 1 184 349 - -
Arst10g01203 423 Gene3D Acid Proteases 18 180 IPR021109 -
Arst10g01203 423 SUPERFAMILY Acid proteases 40 348 IPR021109 -
Arst10g01203 423 MobiDBLite consensus disorder prediction 357 394 - -
Arst10g01203 423 Pfam Xylanase inhibitor N-terminal 42 180 IPR032861 -
Arst10g01203 423 Gene3D Acid Proteases 181 349 IPR021109 -
Arst10g01203 423 MobiDBLite consensus disorder prediction 360 374 - -
Arst10g01203 423 PANTHER ASPARTYL PROTEASES 43 340 IPR001461 GO:0004190|GO:0006508
Arst10g01203 423 ProSiteProfiles Peptidase family A1 domain profile. 1 343 IPR033121 -
Arst10g01203 423 Pfam Xylanase inhibitor C-terminal 221 343 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01203 Arst-Chr10 15011169 15014319 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01203 56 350 Miscellaneous Gene Families AT1G44130 25.472 1.76e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01203 - - gmx:100782209 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01203 10 15011169 15014319 Arst10g01203 10 15011169 15014319 ECH