Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01124 ATGTCTTCACTTCAACTGTTGCAACTAACTAAGCATGGCCAGAATTTTCTGGCTTCAAGGAGGAAAACGTTACTGTTTGCAACTGGTATCTTCGTTGCTGGTGGAACAGCTGCATATATGCAATCAAGGTCAAGGTTTAATAGACGTGATTTAGGTCATTGTAACGGGCACAATGATGATAACCAAGTCACAACAGAGGAGGTTGTGAAGGGTTCTACAGCATCAAAAAATAAACAAAAGAAAGGGGGGTTGAAGTCTCTTCAAGTCCTTGCTGCAATTCTTCTATCTGAGATGGGCAAATTAGGTGCAAGGGACCTTTTAGCTTTAGTTGGCATAGTGGTGTTTCGAACTGCTTTGAGCAACAGGCTAGCAAAAGTGCAAGGCTTCCTATTTCGTGCTGCATTTCTTCGACGAGTGCCATTGTTTTTTCAGCTTATTTCAGAAAATATTCTTTTGTGCTTCCTCTTATCAACCATGCACTCTACATCAAAGTACATAACAGGGACTTTGAGCCTGCATTTCAGAAAAATATTGACGAAGCTAATCCATTCCCACTATTTTGAGAACATGGTGTATTACAAAATATCACATGTAGATGGTCGGATAAATAACCCAGAGCAAAGAATTGCCAGTGATGTGCCAAGGTTCTGTTCAGAATTGAGTGAAATTGTACAGGATGATCTAACGGCAGTTGCTGATGGACTTCTATACACATGGAGGCTGTGTTCATATGCTAGCCCAAAATATGTCTTCTGGATATTGGCCTATGTACTTGGAGCTGGTGCTGCAATCAGAAACTTCTCCCCTTCATTTGGGAAACTTATGTCTAAAGAGCAGCAATTGGAGGGAGAATATCGACAGCTTCACTCACGATTAAGGACTCACTCAGAAAGTATAGCATTTTATGGGGGAGAGAAGAGGGAAGAATCTCATATTCAACAGAAGTTTAAGAACTTGGTTAGACACATGAATGTTGTGTTACATGACCATTGGTGGTTTGGCATGATCCAGGACTTTTTGTTGAAGTACCTTGGTGCTACTGTTGCCGTTATATTGATCATAGAACCTTTCTTTTCTGGTCATCTAAGGCCTGACAGTTCAACTCTAGGGCGTGCAGAGATGTTAAGCAATCTAAGATATCATACAAGTGTCATAATTTCTCTGTTTCAGTCTCTAGGAACTCTTTCTATCAGTGCAAGACGGCTTAATCGTCTCAGTGGGTATGCTGATCGCATTTATGAGTTGATGGCTGTATCAAGGGACCTAAGCATGGTTGATGAGAAATCTTCACTGCAAAGGAAAGGAAGCAAAAATTTCTTAAGTGAAGCTAACTATATTGAATTTTCTGGTGTCAAGGTTGTCACCCCCACTGGTAATGTCTTGGTGGACGATCTGACCCTTAGGGTTGAGTCAGGATCTAATCTTTTGATTACAGGTCCAAATGGCAGTGGAAAGAGCTCGCTTTTCCGTGTTCTAGGCGGTCTTTGGCCGTTGATATCTGGACATATTGTAAAACCAGGCATTGGTGCTGATCTCAACAAGGAGATATTCTATGTGCCACAAAGGCCGTACACTGCTGTGGGAACACTTCGTGATCAATTAATTTATCCTCTCACTGCAGATCAAGAGGTTGAACCACTCACAGAAAGTGGTATGGTGGAGCTATTGAAAAATGTTGACCTTGAATACCTGTTGGACCGTTACCCACCTGAAAAAGAGGTAAACTGGGGCGACGAACTTTCATTGGGTGAACAGCAGAGATTGGGCATGGCTAGACTTTTCTACCATAAGCCAAAATTTGCAATTCTTGATGAGTGCACTAGTGCTGTCACTACTGATATGGAAGAACGGTTTTGTGCTAAAGTACGGGCAATGGGAACATCATGCATTACCATATCACATCGTCCGGCTTTAGTTGCATTCCACGATGTGGTTTTGTCATTGGATGGTGAGGGAGGGTGGAGTGTTCATTACAAAAGGGAGGACTCTTCGACTGAAGTGGGGGTCAATACAATGAAGGCATCTGAGACAAAACGACGGAGTGATGCAAAAGCAGTTCAACGTGCATTTTCCATGAGCAAGAAGGATTATGCATTCTCAAATTCAAAGGCTCAGTCATATATTGCAAAAGTGATAGCATCATCTCCGTCTAAAAATAATGCTGTTTCACCCTCTGCTGTGCCCCAACTTCGTGGTAATACAAGGGTATTACCATTGAGGATAGCTGCAATGTGCAAAGTATTGGTACCCACCGTGTTTGATAAACAAGGTGCACAACTGCTTGCTGTAGCTTTTCTTGTTATTTCAAGAACATGGGTTTCAGACCGTATTGCATCGTTGAATGGTACCACTGTGAAGTTTGTTTTGGAGCAGGATAAAGCTGCCTTTATTCGGTTGATTGGTTTAAGTGTTCTACAAAGTGCTGCATCATCTTTCATTGCACCTTCTATAAGACACTTGACAGCTAGGCTAGCTCTTGGGTGGCGGATTCGTTTGACACAGCATCTACTCAAGAACTACTTGAGAAACAATGCATTCTACAAGGTCTTCCACATGGCAAGCAAAAACATTGACGCAGATCAGAGGATAACTCATGACTTGGAGAAGTTAACAACAGACTTGTCTGGACTGGTCACTGGATTGGTAAAACCATCTGTGGATATCTTGTGGTTCACATGGAGAATGAAGCTGTTAACTGGTCAGAGGGGAGTTGCAATACTCTATGCTTATATGTTACTTGGTCTAGGATTTCTAAGAACTGTTACTCCTGATTTTGGTGATTTGATAAGCCAAGAACAACAACTTGAAGGAACCTTCAGGTTCATGCATGAAAGACTCTGTACTCATGCTGAATCTGTTGCTTTCTTTGGAGGTGGTGCCCGAGAAAAGGCTGTGAGGTGGATTATGGGGAGTGCGATCAGTCGTCTTGGGTTTGAAGAGAGCAGTTCATCTTATATATTTTTCTTTTTCTTGCACCTCATACACAAGAAGTGGTTGTTTGGTATACTGGATGATTTTATCACCAAGCAACTCCCTCATAATGTCACTTGGTTGCTGAGCTTGTTGTATGCCATGGAACATAAGGGAGACCGTGCATCAATAAATACTCAGGGTGAGCTGGCACATGCATTGAGGTTCTTAGCATCTGTTGTTTCTCAAAGCTTTTTAGCTTTCGGTGACATCCTTGAACTGAATAGAAAGTTTGTAGAGCTCTCTGGTGGTATTAATCGGATTTTTGAGCTTGAAGAACTATTGGAGGCAGCACAGTCTGGGAATATGATTGATGCTGATACGTATCCAGTTAGAGATTCTCATTCTAAAGATGTTATTTCCTTTTCAAAAGTTGATATTGTCACTCCTACTCAAAAGATGTTGGCCAGAGAGTTGACATGTGACATTGCGCTTGGCAGAAGTCTGCTCGTTACTGGTCCAAATGGTAGTGGGAAAAGTTCCATTTTCAGAGTTCTTAGAGGACTTTGGCCAATTGCAAGTGGAAGACTATCTAGACCATCTGAAGGTGAGGATCAAGAGGCTGGATCAGGTTGTGGCATTTTCTATGTTCCTCAGCGTCCCTATACTTGCCTGGGAACCCTGCGTGATCAAATTATATATCCCCTGTCCCGTGAGGAAGCAGAAGTTAAAGCATTGAAGATCTACGGAAAAGGTAATAGTCAACTTGCCAGACATGTGTTGGATTCACACTTACAAGTTATCCTAGAGAATGTTCGGTTGAATTATCTTCTAGAGAGGGAGAAGAGTGGCTGGGATGCAACTTTAAACTGGGAAGATATTCTCTCTCTCGGAGAACAACAGAGGCTAGGCATGGCACGGTTGTTCTTCCATAAGCCTAAATTTGGCATCCTTGACGAGTGCACCAATGCCACTAGTGTTGATGTTGAAGAACACTTGTATGGGCTTGCAAAGGAGATGGGAATCACATTTGTTACTTCTTCGCAACGTCCTGCATTAATACCCTTCCATTCCTTGGAACTACGACTGATTGATGGCGAGGGCAACTGGGAGCTTCGTTTGATCAAGCAATGA 4044 0.4236 MSSLQLLQLTKHGQNFLASRRKTLLFATGIFVAGGTAAYMQSRSRFNRRDLGHCNGHNDDNQVTTEEVVKGSTASKNKQKKGGLKSLQVLAAILLSEMGKLGARDLLALVGIVVFRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLHFRKILTKLIHSHYFENMVYYKISHVDGRINNPEQRIASDVPRFCSELSEIVQDDLTAVADGLLYTWRLCSYASPKYVFWILAYVLGAGAAIRNFSPSFGKLMSKEQQLEGEYRQLHSRLRTHSESIAFYGGEKREESHIQQKFKNLVRHMNVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFSGHLRPDSSTLGRAEMLSNLRYHTSVIISLFQSLGTLSISARRLNRLSGYADRIYELMAVSRDLSMVDEKSSLQRKGSKNFLSEANYIEFSGVKVVTPTGNVLVDDLTLRVESGSNLLITGPNGSGKSSLFRVLGGLWPLISGHIVKPGIGADLNKEIFYVPQRPYTAVGTLRDQLIYPLTADQEVEPLTESGMVELLKNVDLEYLLDRYPPEKEVNWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWSVHYKREDSSTEVGVNTMKASETKRRSDAKAVQRAFSMSKKDYAFSNSKAQSYIAKVIASSPSKNNAVSPSAVPQLRGNTRVLPLRIAAMCKVLVPTVFDKQGAQLLAVAFLVISRTWVSDRIASLNGTTVKFVLEQDKAAFIRLIGLSVLQSAASSFIAPSIRHLTARLALGWRIRLTQHLLKNYLRNNAFYKVFHMASKNIDADQRITHDLEKLTTDLSGLVTGLVKPSVDILWFTWRMKLLTGQRGVAILYAYMLLGLGFLRTVTPDFGDLISQEQQLEGTFRFMHERLCTHAESVAFFGGGAREKAVRWIMGSAISRLGFEESSSSYIFFFFLHLIHKKWLFGILDDFITKQLPHNVTWLLSLLYAMEHKGDRASINTQGELAHALRFLASVVSQSFLAFGDILELNRKFVELSGGINRIFELEELLEAAQSGNMIDADTYPVRDSHSKDVISFSKVDIVTPTQKMLARELTCDIALGRSLLVTGPNGSGKSSIFRVLRGLWPIASGRLSRPSEGEDQEAGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAEVKALKIYGKGNSQLARHVLDSHLQVILENVRLNYLLEREKSGWDATLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEHLYGLAKEMGITFVTSSQRPALIPFHSLELRLIDGEGNWELRLIKQ 1347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01124 1347 CDD ABCD_peroxisomal_ALDP 446 654 - -
Arst10g01124 1347 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER 688 1342 - -
Arst10g01124 1347 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER 688 1342 - -
Arst10g01124 1347 ProSitePatterns ABC transporters family signature. 580 594 IPR017871 GO:0005524|GO:0016887
Arst10g01124 1347 Pfam ABC transporter 463 608 IPR003439 GO:0005524
Arst10g01124 1347 Gene3D - 432 709 IPR027417 -
Arst10g01124 1347 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 150 340 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g01124 1347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1104 1336 IPR027417 -
Arst10g01124 1347 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 446 677 IPR003439 GO:0005524
Arst10g01124 1347 Pfam ABC transporter 1128 1293 IPR003439 GO:0005524
Arst10g01124 1347 Gene3D - 1098 1334 IPR027417 -
Arst10g01124 1347 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1110 1345 IPR003439 GO:0005524
Arst10g01124 1347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 443 650 IPR027417 -
Arst10g01124 1347 Pfam ABC transporter transmembrane region 2 90 358 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g01124 1347 Pfam ABC transporter transmembrane region 2 745 1023 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g01124 1347 ProSitePatterns ABC transporters family signature. 1265 1279 IPR017871 GO:0005524|GO:0016887
Arst10g01124 1347 Gene3D ABC transporter type 1, transmembrane domain 104 417 IPR036640 GO:0005524|GO:0016020
Arst10g01124 1347 CDD ABCD_peroxisomal_ALDP 1110 1340 - -
Arst10g01124 1347 SMART AAA_5 471 650 IPR003593 GO:0016887
Arst10g01124 1347 SMART AAA_5 1135 1335 IPR003593 GO:0016887
Arst10g01124 1347 SUPERFAMILY ABC transporter transmembrane region 142 416 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01124 Arst-Chr10 12527502 12539761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01124 1 1347 Acyl Lipid Metabolism Gene Families AT4G39850 77.253 0.0 2118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01124 K25819 - gmx:100813765 2328.52