Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01088 ATGACATCTTGGGTGTTTGAGGAGAATGGACACGACGAGGGAAATCAACAACCCTCCGATTTTATCAACACGAATCTGACAGCCACAAATCTCTCACTTCCAACTGAAACCTTTCTCAGAGCCGCGGTTTCACTCAAGGACCAGGTGGTGGAGGAGACGTGGAAGCGGAGGGAAATGGTTGATCCAACGGTGTATAAGGGTTTGCTGGGCACAGCTTTCACTTGCTTGAGGTCGTACGAGGTCACCGGTAACCACACGGACTTGCAATTATGTGCAGAGATTGTCGACACGTGCGCCACCGTTGCACGTGACTCCCTCAGGCACGTGACGTTTTTATGTGGAAGAGGAGGAGCATATGCGCTTGGTGCGGTTGTCGCTAATTACATGGGGGACCCTCGGAAGCGTGACCTGTTTTTGGGTCTATTCGTTGAGGTTGCAAAAGAGAGAGCCCTGCCTGTTGGACCTGAGGAAGGTGGTTTTGGAATGTCATACGATCTTCTATACGGCCGCGCCGGATTCTTATGGGCCGCGCTATTCATAAAGAAGTACCTAGGAGACGAGGCAGTTCCAAGCGATATTCTAATGCCAATTATCGATGCAATGTTGGCCGGAGGTAGGGCAGGAGCCTCCGACATTAAGGACTGTCCATTGATGTATCGATGGCATGGGACGAGGTACCTTGGCGCAGCGAACGGCCTAGCCGGAATCCTGCATGTGCTGCTCCATTTTCCGCTTCCCGGCGAGGATGCCGAAGATGTGAAGGGAGCTTTAAGGTACTTGATGAGTAAACGGTTCCCTCATAGTGGCAACTACCCGTCGAGCGAAGGGAATCCAAGGGATAAGTTGGTGCAATGGGGTCATGGCGCAACCGGCATGGCCATTACTCTGTCCAAAGCTGCAGAGGTTTTTCCAAATGACAGAGAACTCCGAGACGCGGCAATCGAAGCGGGGGAGGTAGTGTGGAAGAGTGGCCTGGTGAAGAAGGTAGGACTTGCGGACGGCGTGGCAGGAAACGCCTACGGCTTCCTTTCGCTCTTCAGACTAACCAAAGAACAGATCTACGAAGAGAGAGCAAAAGTCTTCTCATGTTTCTTGTACCGCAATGGAAGTTCTCTTATTGCGGGTGCTGATGGTGGAAATGCTTATTCCCTCTTCCAAGGTATTGCTGGAACTGCATGCCTCTGGTTTGATCTTGTTGCACCTCATAACTCTAGATTTCCGTGTTATGAATTATAG 1236 0.5121 MTSWVFEENGHDEGNQQPSDFINTNLTATNLSLPTETFLRAAVSLKDQVVEETWKRREMVDPTVYKGLLGTAFTCLRSYEVTGNHTDLQLCAEIVDTCATVARDSLRHVTFLCGRGGAYALGAVVANYMGDPRKRDLFLGLFVEVAKERALPVGPEEGGFGMSYDLLYGRAGFLWAALFIKKYLGDEAVPSDILMPIIDAMLAGGRAGASDIKDCPLMYRWHGTRYLGAANGLAGILHVLLHFPLPGEDAEDVKGALRYLMSKRFPHSGNYPSSEGNPRDKLVQWGHGATGMAITLSKAAEVFPNDRELRDAAIEAGEVVWKSGLVKKVGLADGVAGNAYGFLSLFRLTKEQIYEERAKVFSCFLYRNGSSLIAGADGGNAYSLFQGIAGTACLWFDLVAPHNSRFPCYEL 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01088 411 Pfam Lanthionine synthetase C-like protein 59 411 IPR007822 GO:0031179
Arst10g01088 411 CDD euk_LANCL 64 407 - -
Arst10g01088 411 PRINTS LanC-like protein superfamily signature 61 79 IPR007822 GO:0031179
Arst10g01088 411 PRINTS LanC-like protein superfamily signature 282 302 IPR007822 GO:0031179
Arst10g01088 411 PRINTS LanC-like protein superfamily signature 226 242 IPR007822 GO:0031179
Arst10g01088 411 PRINTS LanC-like protein superfamily signature 329 342 IPR007822 GO:0031179
Arst10g01088 411 PRINTS LanC-like protein superfamily signature 164 179 IPR007822 GO:0031179
Arst10g01088 411 PRINTS LanC-like protein superfamily signature 381 398 IPR007822 GO:0031179
Arst10g01088 411 PRINTS Eukaryotic LanC-like protein family signature 397 411 IPR020464 -
Arst10g01088 411 PRINTS Eukaryotic LanC-like protein family signature 262 277 IPR020464 -
Arst10g01088 411 PRINTS Eukaryotic LanC-like protein family signature 300 321 IPR020464 -
Arst10g01088 411 PRINTS Eukaryotic LanC-like protein family signature 345 363 IPR020464 -
Arst10g01088 411 PRINTS Eukaryotic LanC-like protein family signature 194 209 IPR020464 -
Arst10g01088 411 Gene3D - 2 411 IPR012341 GO:0005975
Arst10g01088 411 PANTHER LANC-LIKE PROTEIN 20 411 - -
Arst10g01088 411 SMART LANC_like_2 58 411 IPR007822 GO:0031179
Arst10g01088 411 SUPERFAMILY LanC-like 45 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01088 Arst-Chr10 11566474 11575941 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01088 - - aprc:113849930 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01088 10 11566474 11575941 Arst10g01088 10 11566474 11575941 ECH