LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst10g01004	ATGAATCCTTTGTGCTGCATTGCTCCGGTTTCGATCGATCGGGACAGGGCGAATCCCGTAGCTACGAAATCGCCAACTCACTGCCAGCTAGGGCTCGATGCGTCGGTCAGGACGGTGAACGGCGGCTCCAAATCGAGCTCCTCTGCGCCGGATTCCTCTCATGGCGGTGGCGATTCTCTGAAGTCGTCTTCCGGCGGGAACCGCGGCGAAGAGGAGGATTTGTCAACGACGACGGCGGAGCCCCGGGAGTCGAAGGTGTTCGGTGGCGGGAACGGAGTGGCCGGAAGCGTGGCCGGAATCTTGTACAAGTGGGTGAACTACGGGAAAGGGTGGAGGTCGAGGTGGTTCGTGCTGGAAGATGGAGTGCTTTCGTACTACAAGATTCATGGTCCGGATAAGATCGTGGTGAGCCCAGCGAGGGACCGGAGCGTGAGAGTGATCGGCGAGGAGTCATCGAAGTTCGTGAAGAAGAACAATTGGAGCCTGAATCGAGTAGCAGGAGTTAGTGGTGGCAACTCTACTAAGCAATGCAAGCCCTTCGGTGAGATACACTTGAAGGTTTCTTCGGTTCGGGCTAGCAAATCTGATGATAAGCGGCTATCCATATTTACCGGGACAAAAACTCTACACTTGAGGTGTGTATCTAGAGAAGACAGAGCTATGTGGATTGAGGCCCTGCAGTCCACGAAAGATCTTTTTCCTAGAGCTCTAACAAGTAGTGATCTTGCAACTCCAGAAGATATTGTAGTTTCAACTGAGAAGCTGCGATCTCGATTGTCAGAGGAAGGCATAAGTGAGGCAGTTATTAATGACTGCGAGTCTATTATGCTCTCCGAAGTCTCTTATCTTCAAGGCAAATTGAAGTTTCTTCAGCAGAAACATGTAATGTTGCTGGACACCTTAAAACAACTAGAGACAGAGAAAATAGAGTTGGAAACCACTGTAGTGGATGAAACAAAGGAGCGTGAATCATATTGTGGACAAGGGAACAGAAGATTTAGTGATTTCTATTCTGTCATGTCGGAGGGCAGTGCTACTGATTCAGTAGCGGATAATGAAAGTCAAGACGGAGCAGATGTTGAAACTGATGATGATGATGGTGCATTTTTTGACACAAATGAGTTTTTGTGTTCAGATGCCTTAAGAAGTGCTTCTTATCGAAGTAGGGAGGGTATGACAAATGCAAGCATACATGATAGAGATTGTTTACTTTCTGATGGTTTGCATGGGTTTGAGAAGGGAATCAAAGATGTAAGCTATCCATATGTCAGAAGAAGGGATAACTTACCAGAGCCAAAAGAAAAAGAGAGGCCTGTTGGCTTGTGGTCAATTATTAAATCTTCATTGCAAAAGTGTTTTGAAGATTTGGAGTATTCATATCTAGTTGATAGAGCATTGGAATGGGGAAAGCAGGAGAATGATTTGATGAGAATCCTAAATGTTGCAGCTTTTGCTGTGTCCGGCTATGCATCCACTGAAGGTCGGCAGTGCAAACCTTTCAATCCTCTACTTGGGGAGACATATGAAGCTGACTATCCAGATAAAGGTCTCAGATTCTTCTCTGAAAAGGTTAGTCATCATCCCATGGTTGTTGCTTGTCACTGTGAGGGAAGAGGATGGAAGTTCTGGGCGGACTCTAACTTGAAAGGGAAATTCTGGGGGCGTTCTATTCAGTTAGATCCTGTGGGTGTCCTCACCCTACAGTTTGAGGATGGTGAAACATTTCAATGGAGCAAGGTCACCACTTCAATTTACAATATCATACTAGGTAAAATTTATTGTGATCACTATGGTACAATGCGCATCAAGGGCAGTGGCAACTACTCTTGCAAACTGAAGTTCAAAGAGCAATCTATCATAGATCGAAACCCACACCAGGTCCATGGATTTGTTCAAGACAACAGAACCGGAGAGAAGGTAGCAATGTTGATTGGGAAATGGGACGAAGCAATGTACTATGTCCTTGGGGACCCAACTACAAAGCCAAAAGGTTATGATCCAATGACAGAAGCTGCATTATTGTGGGAAAGGGACAACTGCAGCACCAAGACAAGATACAACCTCTCTCCTTTTGCAATATCATTGAATGAAATAATGCCCGGCATGATAGAGAAGTTACCTCCCACTGACTCAAGGTTGAGACCCGATCAAAGACATTTAGAAAATGGAGAATATGAGTTGGCGAATGCAGAGAAATTAAGACTAGAACAGTTGCAGAGACAGGCAAGAAAGATGCAGGAAAGAGGATGGCAGCCTAGATGGTTTCAGAAGAATGAGGATGGGTCTTACCGATACAAGGGTGGCTATTGGGAAGCAAGAGAAAAGCATAGTTGGGATGGAATCCCTGATATATTTGGACAGAGTTGTGATTTACCTTCATGTTCTGAAGATACTATCATTACTCTGTCCTAA	2412	0.4544	MNPLCCIAPVSIDRDRANPVATKSPTHCQLGLDASVRTVNGGSKSSSSAPDSSHGGGDSLKSSSGGNRGEEEDLSTTTAEPRESKVFGGGNGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKIVVSPARDRSVRVIGEESSKFVKKNNWSLNRVAGVSGGNSTKQCKPFGEIHLKVSSVRASKSDDKRLSIFTGTKTLHLRCVSREDRAMWIEALQSTKDLFPRALTSSDLATPEDIVVSTEKLRSRLSEEGISEAVINDCESIMLSEVSYLQGKLKFLQQKHVMLLDTLKQLETEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSATDSVADNESQDGADVETDDDDGAFFDTNEFLCSDALRSASYRSREGMTNASIHDRDCLLSDGLHGFEKGIKDVSYPYVRRRDNLPEPKEKERPVGLWSIIKSSLQKCFEDLEYSYLVDRALEWGKQENDLMRILNVAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMVVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMRIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAALLWERDNCSTKTRYNLSPFAISLNEIMPGMIEKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARKMQERGWQPRWFQKNEDGSYRYKGGYWEAREKHSWDGIPDIFGQSCDLPSCSEDTIITLS	803

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst10g01004	803	FunFam	Oxysterol-binding protein-related protein 2A	717	787	-	-
	Arst10g01004	803	MobiDBLite	consensus disorder prediction	65	79	-	-
	Arst10g01004	803	FunFam	oxysterol-binding protein-related protein 1D isoform X1	506	679	-	-
	Arst10g01004	803	MobiDBLite	consensus disorder prediction	39	64	-	-
	Arst10g01004	803	Coils	Coil	728	748	-	-
	Arst10g01004	803	Gene3D	-	506	673	-	-
	Arst10g01004	803	MobiDBLite	consensus disorder prediction	39	88	-	-
	Arst10g01004	803	Pfam	Pleckstrin homology domain	99	228	-	-
	Arst10g01004	803	CDD	PH_ORP_plant	97	235	-	-
	Arst10g01004	803	Coils	Coil	287	321	-	-
	Arst10g01004	803	Pfam	Oxysterol-binding protein	447	774	IPR000648	GO:0008289
	Arst10g01004	803	SMART	PH_update	95	233	IPR001849	-
	Arst10g01004	803	Gene3D	-	717	781	-	-
	Arst10g01004	803	SUPERFAMILY	Oxysterol-binding protein-like	437	787	IPR037239	-
	Arst10g01004	803	MobiDBLite	consensus disorder prediction	344	364	-	-
	Arst10g01004	803	Gene3D	-	94	233	IPR011993	-
	Arst10g01004	803	ProSiteProfiles	PH domain profile.	94	231	IPR001849	-
	Arst10g01004	803	PANTHER	OXYSTEROL-BINDING PROTEIN-RELATED	97	773	IPR000648	GO:0008289
	Arst10g01004	803	SUPERFAMILY	PH domain-like	16	228	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst10g01004	Arst-Chr10	9825799	9832077	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst10g01004	K20456		-	gmx:100788779	1389.79

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Arst10g01004	10	9825799	9832077	Arst10g01004	10	9825799	9832077	ECH