Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00881 ATGTCGCTTGCATCGTTCTCGATCCTCCGCCACCACCACCGCACGGTGGTGTCTCCCGCCTCATCACTCCCAACTCTCAACACCATCCTCCACCGTTGCTTCCGGTGCCTCCCGTTCGGCGCGGCGGCGGCCACCGCCAGACACCACCGAAACCCTAACCAGCAACGGCAACAGCAACCCCCAAGCAAGAACCTCCTGAAAGCAAAGCAAACCTTCAAAAAGTTCTCCTCCTCCTTGGCTCCCGTCCTCTCCCTCGAGGATTCGCCTCCCTTGTCCGACTCTCAAGCCGTCGGCATCGTCGCAGCCTCCCAGGCCAACTTCATGCGCGTCATCGTCCAAGAACAAGAACCTTCCAGAACGAAACTTCCAGAAGCCTCTTCTTCTTCTTCGGCTGGCTTGGAGCTACTGTGCGTGGTGAGGGAGCTGCTGAAGAAGATAAAGCGGAGAGTGATGGTTGGTGACAAGGTTCTAGTAGGTTCCATTGACTGGGTTGATCGAAGGGGCATGATCGAGAATGTGTTCCAGAGGGATAACGAGATTCTTGACCCTCCCGTCGCCAATGTTGATCACCTGCTTGTGCTTTTTTCGCTTGACCAACCCAAGGTTGAGCCGTTTATGCTCACAAGGTTCCTTGTTGAGGCCGAGTCCACTGGTATTCCTCTCACCCTTGCGCTCAATAAGATTGAGCTTGTGGATGGAGAGGCTGTAAGTTCGTGGAAGTCTAGGTTGCGCAGCTGGGGCTATGAGCCTATTTTCTGCAGCGTGGAGTCTGGACATGGACTTGATCTACTTGCATTCAAATTGAGAGACCAAACAACCGTGATCGTAGGTCCTAGTGGAGTTGGGAAGTCTAGTTTGATCAATGCCCTCAGAAGCAATCCCCGTGTTTGTGATGCTGAAGAAGGGGAGAATTGGTTCGAACCCATTTTAGGTAGCAAGTGGTTTGAAGAACAGAGAGTTGGGGAGGTTTCAACAAGAAGTGGCAGAGGGAAGCATACTACTCGCCATGTCTCTTTGCTTCCATTGTCTGGAGGGGGTTATCTTGCCGACACACCTGGATTTAACCAGCCTAGTTTATTGAAAGTGACAAAGCAGTCTCTTGCACAGACTTTTCCCGAAATCAGGAAAATGGTTAGTGCCAATGAGCCTGCAAAATGCTCATTTAATAATTGTCTACATCTGGGTGAACCTGGGTGCATTGTGAAGGGCGATTGGGAAAGATATTCATACTATTTTCAACTGCTTGATGAGATCAGAATCAGAGAGGAGTTCCAGCTAAGGACATTTGGAACTAAAAGAGAAGGTGATGTAAGGTATGAAAAGCAAGTTAAAAATTATGAATTATACACAGTACTGGGAATTCCTTTTAACAATTATAATCTAATATACATTAGTTTCCATATATTATGA 1410 0.4872 MSLASFSILRHHHRTVVSPASSLPTLNTILHRCFRCLPFGAAAATARHHRNPNQQRQQQPPSKNLLKAKQTFKKFSSSLAPVLSLEDSPPLSDSQAVGIVAASQANFMRVIVQEQEPSRTKLPEASSSSSAGLELLCVVRELLKKIKRRVMVGDKVLVGSIDWVDRRGMIENVFQRDNEILDPPVANVDHLLVLFSLDQPKVEPFMLTRFLVEAESTGIPLTLALNKIELVDGEAVSSWKSRLRSWGYEPIFCSVESGHGLDLLAFKLRDQTTVIVGPSGVGKSSLINALRSNPRVCDAEEGENWFEPILGSKWFEEQRVGEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTKQSLAQTFPEIRKMVSANEPAKCSFNNCLHLGEPGCIVKGDWERYSYYFQLLDEIRIREEFQLRTFGTKREGDVRYEKQVKNYELYTVLGIPFNNYNLIYISFHIL 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00881 469 Hamap Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 96 422 IPR004881 GO:0003924|GO:0005525
Arst10g00881 469 NCBIfam ribosome small subunit-dependent GTPase A 150 293 IPR004881 GO:0003924|GO:0005525
Arst10g00881 469 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 177 357 IPR030378 GO:0005525
Arst10g00881 469 SUPERFAMILY Nucleic acid-binding proteins 96 176 IPR012340 -
Arst10g00881 469 Gene3D - 91 173 IPR012340 -
Arst10g00881 469 ProSiteProfiles EngC GTPase domain profile. 186 355 IPR010914 GO:0003924|GO:0005525
Arst10g00881 469 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 66 442 IPR004881 GO:0003924|GO:0005525
Arst10g00881 469 Pfam RsgA GTPase 173 359 IPR010914 GO:0003924|GO:0005525
Arst10g00881 469 Gene3D - 174 359 IPR027417 -
Arst10g00881 469 Gene3D Probable gtpase engc; domain 3 361 423 - -
Arst10g00881 469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 420 IPR027417 -
Arst10g00881 469 CDD YjeQ_EngC 186 416 IPR004881 GO:0003924|GO:0005525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00881 K06949 - gmx:100801862 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00881 10 7919834 7922271 Arst10g00881 10 7919834 7922271 ECH