Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00598 ATGGCTTCCGCCGTCCTAGCCAACCGAAACGAACCTAATTGGCCGCAACATAGAGGCGGTGCAGCTGGATTCATGGGAAAAGTACCATTTTCTAACCCTAACCCTAACTCAAAATTTGGGAACAAAAAGAACCAATCGGCGTCAGATGATGCTTCATCCATCAACCGCAGGTCCAACGACGGTAATCATTCTCAATATGTGACGTTCAACGTGGCGTCGTACACAAAAAAGGAGCTGAACGAGCTCAAGAATCGCCTGATCTTGGAGCTCGAGCAGATTCGAAAGCTTAAGAAACAAATCGAGAGCGGAGAATATCAGCCCAGGCAGAGCTTCAACGGCCCTCCTAAAAAATCATCGAGCAAGAAAATCTCCGGCAACAAGCGGCCATTTCCGGTGAATTCCATCACCAAAGATTTGAAACGGTCGAATTCGGAGATTGGAAACTTGATGAAGTCCTGCTCGCAGGTTCTACAGAAGATCATGAAGCACAAGGTTGGGTGGATCTTCAACACCCCCGTTGATGTCGTTGGAATGGGTCTTCACGATTATTATGATATAGTGAAGAAACCCATGGATCTGGGCACCGTGAAGTCCAATCTCGCGAAGAACGTGTATTCCTCGCCGGCTGATTTTGCCTCCGATGTGCGGTTGACGTTCAAAAACGCGCTGACATATAACCCCCCTGGTCACGATGTGCACAACATGGCTGACCTGCTTTTAACCAAGTTTGAAGAGCTGTATCGTCCCGTGCATGAGAAATTCGAGGATTCGATGAGGCAGCAGGATCATGATGTTGATGAGGAATTGCAGGCCAGTTCCTGGAATCATGCTGAGCCAGAAAGGATTGAGAGGGTTAAGAACAAGAAGGAGAATGTGATCCCTCCGGCAAGGTTTCAACCCGAGCCAGTGCAGGCCCCTGCGAGCTCTTCGAACCCTCCAATGGTGCAGTCGCCAGTGCGCACTCCTTCCCCTATGAGAGCCCCTCCGGTGAAGCCTTTGAAGCAGCCAAAGCCTAAGGCGAAGGACCCCAATAAGAGGGAGATGAGCCTTGAGGAGAAACACAAGTTGGGTATTGGGCTGCAGAGTTTGCCTCCTGAGAAAATGGAGCAGGTGGTACAGATCATAAGGAAGAGGAATGGGAACCTTAAGCAGGATGGGGATGAGATTGAGCTTGATATTGAGGCTGTTGACACTGAGACCCTTTGGGAACTTGATCGGTTGGTGACCAATTGGAAGAAGATGATGAGCAAAATTAAGCGGCAGGCACTACTTGGCAACTTGAACAACAATGCCGCACCCAACAAATCCAATGGGGTAAAGTTTTTTTCATTGTGTGCATCTTCCTCTGTTTAA 1353 0.4885 MASAVLANRNEPNWPQHRGGAAGFMGKVPFSNPNPNSKFGNKKNQSASDDASSINRRSNDGNHSQYVTFNVASYTKKELNELKNRLILELEQIRKLKKQIESGEYQPRQSFNGPPKKSSSKKISGNKRPFPVNSITKDLKRSNSEIGNLMKSCSQVLQKIMKHKVGWIFNTPVDVVGMGLHDYYDIVKKPMDLGTVKSNLAKNVYSSPADFASDVRLTFKNALTYNPPGHDVHNMADLLLTKFEELYRPVHEKFEDSMRQQDHDVDEELQASSWNHAEPERIERVKNKKENVIPPARFQPEPVQAPASSSNPPMVQSPVRTPSPMRAPPVKPLKQPKPKAKDPNKREMSLEEKHKLGIGLQSLPPEKMEQVVQIIRKRNGNLKQDGDEIELDIEAVDTETLWELDRLVTNWKKMMSKIKRQALLGNLNNNAAPNKSNGVKFFSLCASSSV 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00598 450 ProSiteProfiles NET domain profile. 338 419 IPR027353 -
Arst10g00598 450 MobiDBLite consensus disorder prediction 335 349 - -
Arst10g00598 450 ProSiteProfiles Bromodomain profile. 161 233 IPR001487 GO:0005515
Arst10g00598 450 Gene3D - 341 418 IPR038336 -
Arst10g00598 450 MobiDBLite consensus disorder prediction 317 334 - -
Arst10g00598 450 MobiDBLite consensus disorder prediction 258 349 - -
Arst10g00598 450 MobiDBLite consensus disorder prediction 104 134 - -
Arst10g00598 450 PRINTS Bromodomain signature 180 196 IPR001487 GO:0005515
Arst10g00598 450 PRINTS Bromodomain signature 214 233 IPR001487 GO:0005515
Arst10g00598 450 PRINTS Bromodomain signature 164 177 IPR001487 GO:0005515
Arst10g00598 450 PRINTS Bromodomain signature 196 214 IPR001487 GO:0005515
Arst10g00598 450 CDD Bromo_plant1 149 247 IPR037377 -
Arst10g00598 450 Coils Coil 76 99 - -
Arst10g00598 450 MobiDBLite consensus disorder prediction 1 63 - -
Arst10g00598 450 Gene3D - 42 269 IPR036427 GO:0005515
Arst10g00598 450 SMART bromo_6 142 252 IPR001487 GO:0005515
Arst10g00598 450 Pfam Bromodomain extra-terminal - transcription regulation 347 409 IPR027353 -
Arst10g00598 450 PANTHER OSJNBA0053K19.4 PROTEIN 56 429 - -
Arst10g00598 450 MobiDBLite consensus disorder prediction 30 63 - -
Arst10g00598 450 Pfam Bromodomain 153 237 IPR001487 GO:0005515
Arst10g00598 450 MobiDBLite consensus disorder prediction 258 291 - -
Arst10g00598 450 SUPERFAMILY Bromodomain 143 255 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00598 Arst-Chr10 4998722 5000357 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00598 - - adu:107468545 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00598 10 4998722 5000357 Arst10g00598 10 4998722 5000357 ECH