Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00570 ATGTCTCACAGTTTCACCAATCCCTTGTTCTTATTCTTGGCAATGGATTATATGTTCATTTTTGGAAGTGTCATAGCTTCTAGTTTGGTGCTTGTGCTTTTTCTGTACGGTTCTACATCAAACAAGAGAAAATCCAGTGTTCCAAGTGGAACAACACATGCACAAAGTATAAAGACATCAGAAAATGGTACATGGAATCCACCAGAAGTCTCAGAAGGATGTGATGACATCATCATTGTAGGTGCTGGTGTTGCTGGTGCAGCCCTTGCTTTCACTCTTGGAAAGGATGGAAGACGAGTTCATGTTATCGAAAGGGACTTGAATGAACAAGACAGGATTGTGGGTGAATTGCTTCAACCTGGGGGCTATCTTAAGCTGATTGAGTTAGGACTTGAGGATTGTGTGGATGAAATTGATGCACAACAAGTCTTTGGCTATGCCCTTTACAAAGATGGGAAAAATACCAAGCTCTCTTATCCTTTGGAAAAGTTTAGTTCTGATATTTCCGGTAAAAGCTTTCACAATGGCCGTTTCATCCAAAGAATGCGAGCGAAGGCTTCTTCTCTTCCCAATGTAAAATTAGAACAAGGAACTGTCACATCTCTATTAGAAGAAAATGGAATTGTCAAAGGAGTTCACTACAAAACTAAGAGTGGAGAAGAGCTTACAGCAAAGGCTCCTCTCACCATAGTTTGTGATGGTTGTTTTTCCAACTTAAGGCGTTCTCTTTGCAATCCTAAGGTTGATCTACCATCTTATTTTGTTGGTCTAATCCTGGAGAATTGTAATCTTCCATATGCAAACCATGGACATGTTATCTTAGGTGATCCTTCACCAATCTTGTTTTATCCAATCAGCAGCACTGAAATTCGGTGTTTGGTGGATGTGCCTGGCCAAAAACTACCTTCTCTTGGCAATGGCGACATGGCACTTTATCTGAAAACAGTGGTGGCTCCTCAGGTGCCTTCAGAGCTGCATGATTCTTTTATAGCAACAGTGGAAAAAGGGAACATAAGAAGCATGCCAAATAGAAGCATGCCTGCATCACCATATCCAACACCTGGTGCTCTTCTAATGGGTGACGCATTCAACATGCGTCACCCTTTAACAGGAGGGGGAATGACTGTGGCCTTGTCTGACATTGTTCTGCTAAGAGATCTTCTTAGACCTTTGCGCGATCTCCATGATTCTACTGCTCTTTGCAAGTATCTTGAATCATTCTACACTCTACGTAAGCCAGTGGCATCAACCATAAACACATTGGCAGGTGCATTGTACAAGGTGTTCTGCGCATCACCTGATCCGGCTAGGAAGGAAATGAGGCAAGCATGTTTTGATTATTTGAGCCTTGGAGGTGTGTTCTCTCAGGGACCAATAGCTCTACTCTCTGGTCTCAATCCTCGCCCATTAAGCTTGGTTCTCCATTTCTTTGCTGTCGCTATATATGGCGTTGGCCGCTTGCTCGTGCCATTTCCTTCACCAACACGCATGTGGATTGGAGCTAGATTGATCTCTGGAGCATCAGGTATAATCTTCCCTATTATCAAGGCTGAAGGAGTTAGACAAATGTTCTTCCCAGTAACTGTGCCAGCATACTACAGAACTCCCCCTGTTAATTTGCAGAACTAA 1629 0.4291 MSHSFTNPLFLFLAMDYMFIFGSVIASSLVLVLFLYGSTSNKRKSSVPSGTTHAQSIKTSENGTWNPPEVSEGCDDIIIVGAGVAGAALAFTLGKDGRRVHVIERDLNEQDRIVGELLQPGGYLKLIELGLEDCVDEIDAQQVFGYALYKDGKNTKLSYPLEKFSSDISGKSFHNGRFIQRMRAKASSLPNVKLEQGTVTSLLEENGIVKGVHYKTKSGEELTAKAPLTIVCDGCFSNLRRSLCNPKVDLPSYFVGLILENCNLPYANHGHVILGDPSPILFYPISSTEIRCLVDVPGQKLPSLGNGDMALYLKTVVAPQVPSELHDSFIATVEKGNIRSMPNRSMPASPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVLLRDLLRPLRDLHDSTALCKYLESFYTLRKPVASTINTLAGALYKVFCASPDPARKEMRQACFDYLSLGGVFSQGPIALLSGLNPRPLSLVLHFFAVAIYGVGRLLVPFPSPTRMWIGARLISGASGIIFPIIKAEGVRQMFFPVTVPAYYRTPPVNLQN 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00570 542 Pfam Squalene epoxidase 225 498 IPR013698 GO:0004506|GO:0016020|GO:0050660
Arst10g00570 542 MobiDBLite consensus disorder prediction 40 64 - -
Arst10g00570 542 SUPERFAMILY FAD/NAD(P)-binding domain 76 450 IPR036188 -
Arst10g00570 542 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 353 368 - -
Arst10g00570 542 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 76 98 - -
Arst10g00570 542 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 225 240 - -
Arst10g00570 542 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 368 384 - -
Arst10g00570 542 Pfam NAD(P)-binding Rossmann-like domain 79 105 - -
Arst10g00570 542 PANTHER SQUALENE MONOOXYGENASE 22 537 IPR040125 GO:0004506|GO:0016126
Arst10g00570 542 FunFam Squalene monooxygenase 2 69 449 - -
Arst10g00570 542 Gene3D - 75 455 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00570 Arst-Chr10 4765195 4768915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00570 56 537 Miscellaneous Gene Families AT1G58440 77.801 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00570 K00511 - gmx:100796946 882.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00570 10 4765195 4768915 Arst10g00570 10 4765195 4768915 ECH
Arst3g04271 3 118014285 118017143 Arst10g00570 10 4765195 4768915 PCT