Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00563 ATGAAAACATGCAAGATTTCATTTTCTCCTATCACTATCTTAGGTTCATTATTATGCATTATGGGTTATGTATATGCTCATGATTCACCAAAAGACTATGTTGATGCACACAATGTAGCAAGATCAGAAGTGGGAGAACCAAGTTTGATTTGGGACGATTCTGTTGCAGCATATGCACAAAATTATGCCAATCAACGGCGAAAGGATTGCGAGCTGATCCATTCACATGGGCCTTATGGAGAGAACCTTGCATGGAGTAGCAGTAATGATTTTTCAGGTGTAGATGGTGTGAAATTATGGGTAGACGAAAAGGCATACTTTGATTACATGTCAAACTCATGTTCTGATAACGAAATGTGTGGTCATTATACTCAAGTGGTTTGGAAAAACACATTGCGCGTTGGTTGTGCCAAAGTGATTTGCGACAATAATGGAGGCACTTTCATTACTTGTAACTATGATCCTCCTGGCAATTACATTGGAGAAAGACCTTACTAA 498 0.3876 MKTCKISFSPITILGSLLCIMGYVYAHDSPKDYVDAHNVARSEVGEPSLIWDDSVAAYAQNYANQRRKDCELIHSHGPYGENLAWSSSNDFSGVDGVKLWVDEKAYFDYMSNSCSDNEMCGHYTQVVWKNTLRVGCAKVICDNNGGTFITCNYDPPGNYIGERPY 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00563 165 PRINTS Venom allergen 5 signature 119 138 IPR002413 -
Arst10g00563 165 PRINTS Venom allergen 5 signature 49 67 IPR002413 -
Arst10g00563 165 PRINTS Venom allergen 5 signature 94 109 IPR002413 -
Arst10g00563 165 Pfam Cysteine-rich secretory protein family 34 153 IPR014044 -
Arst10g00563 165 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 31 162 IPR001283 -
Arst10g00563 165 ProSitePatterns CRISP family signature 1. 121 131 IPR018244 GO:0005576
Arst10g00563 165 FunFam Putative pathogenesis-related protein 1 27 165 - -
Arst10g00563 165 PRINTS Allergen V5/Tpx-1 family signature 120 136 IPR001283 -
Arst10g00563 165 PRINTS Allergen V5/Tpx-1 family signature 148 161 IPR001283 -
Arst10g00563 165 PRINTS Allergen V5/Tpx-1 family signature 49 67 IPR001283 -
Arst10g00563 165 PRINTS Allergen V5/Tpx-1 family signature 96 109 IPR001283 -
Arst10g00563 165 SUPERFAMILY PR-1-like 18 165 IPR035940 -
Arst10g00563 165 CDD CAP_PR-1 30 165 - -
Arst10g00563 165 Gene3D CAP 28 165 IPR035940 -
Arst10g00563 165 ProSitePatterns CRISP family signature 2. 148 159 IPR018244 GO:0005576
Arst10g00563 165 SMART SCP_3 28 161 IPR014044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00563 Arst-Chr10 4702806 4703303 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00563 K13449 - zju:107427101 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00563 10 4702806 4703303 Arst10g00563 10 4702806 4703303 ECH