Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00561 ATGGGTGTGACTAAGATCTCATCAACAACGCTTCCTCTCATGGCTGCCATAACCCTAACCATATTATTATTATTATCATCACAAGTTTGTTATGCACAAAACGCACCCCAAGACTACATCAACGCTCACAACAATGCCCGTTCCAAAGTTGGGGTTGGTCCAATGACATGGAATACAACCCTTGCTTCTTTTGCACAAAACTATACTAACAAACTCAAAGAAAGTTGTAACTTGGTGCACTCTGGGGGTCCTTATGGAGAGAACCTTGCAGGGAGTAGCGGCGATCTTACGGGCACCGCCGCGGTGAACTTGTGGGTGGCGGAGAAGCAATACTATCACTACAACTCTAATTCTTGTGACTCCGGCAAGGTTTGCGGCCACTATACTCAGGTGGTTTGGCGCAGCTCGATTCATCTTGGGTGTGCCAAAGAGAGGTGTAAGAATGGAGGAACAGTTATAAGTTGTAACTATGCTCCACGTGGCAATATTATTGGCCGAAAACCTTACTAG 510 0.4588 MGVTKISSTTLPLMAAITLTILLLLSSQVCYAQNAPQDYINAHNNARSKVGVGPMTWNTTLASFAQNYTNKLKESCNLVHSGGPYGENLAGSSGDLTGTAAVNLWVAEKQYYHYNSNSCDSGKVCGHYTQVVWRSSIHLGCAKERCKNGGTVISCNYAPRGNIIGRKPY 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00561 169 Pfam Cysteine-rich secretory protein family 41 157 IPR014044 -
Arst10g00561 169 SUPERFAMILY PR-1-like 21 169 IPR035940 -
Arst10g00561 169 PRINTS Allergen V5/Tpx-1 family signature 101 114 IPR001283 -
Arst10g00561 169 PRINTS Allergen V5/Tpx-1 family signature 152 165 IPR001283 -
Arst10g00561 169 PRINTS Allergen V5/Tpx-1 family signature 55 73 IPR001283 -
Arst10g00561 169 PRINTS Allergen V5/Tpx-1 family signature 125 141 IPR001283 -
Arst10g00561 169 CDD CAP_PR-1 36 169 - -
Arst10g00561 169 SMART SCP_3 34 165 IPR014044 -
Arst10g00561 169 ProSitePatterns CRISP family signature 1. 126 136 IPR018244 GO:0005576
Arst10g00561 169 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 38 166 IPR001283 -
Arst10g00561 169 FunFam Putative pathogenesis-related protein 1 33 169 - -
Arst10g00561 169 ProSitePatterns CRISP family signature 2. 152 163 IPR018244 GO:0005576
Arst10g00561 169 Gene3D CAP 33 169 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00561 Arst-Chr10 4659146 4659792 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00561 K13449 - qsu:112016185 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00561 10 4659146 4659792 Arst10g00561 10 4659146 4659792 ECH