Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00559 ATGGTTAATTCTTGCTTACACAAGATTTCATTTATTCCTCTCCTCTGTGTTTTAGGGTTAGGCATTGTGGCCGATATAACCGCCTATGCTCAAGATTCACCGCAAGACTATCTTGATGCTCACAACGCAGCAAGATCAGAGGCAGGTGTAGCCGATTTGGCTTGGGACGACGACGTTGCGGCGTTCGCCGAGAACTACGCATCGGAACGCCAAGGGGACTGCGAAATGATTCACTCCGGTGGCGGCGACGAGGGTTACGGCGAGAACATTGCATGGAGCAGTGGTGATCTTGCAGGCAGCGAAGCAGTGGCAATGTGGGCGGATGAGAAAGACAAGTATGACTACGATTTAAACTCATGTGTTGGCGGAGAGTGCCGTCACTACACTCAAGTTGTTTGGAGTAACACTATTCGGCTTGGATGTGCCAAAGTGAATTGCGATAATGGAGGCACTTTCATTACTTGTAACTACCATCCTCCAGGAAATTATGTTCACCAAAGGCCTTACTAG 510 0.4882 MVNSCLHKISFIPLLCVLGLGIVADITAYAQDSPQDYLDAHNAARSEAGVADLAWDDDVAAFAENYASERQGDCEMIHSGGGDEGYGENIAWSSGDLAGSEAVAMWADEKDKYDYDLNSCVGGECRHYTQVVWSNTIRLGCAKVNCDNGGTFITCNYHPPGNYVHQRPY 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00559 169 Pfam Cysteine-rich secretory protein family 38 157 IPR014044 -
Arst10g00559 169 PRINTS Allergen V5/Tpx-1 family signature 102 115 IPR001283 -
Arst10g00559 169 PRINTS Allergen V5/Tpx-1 family signature 125 141 IPR001283 -
Arst10g00559 169 PRINTS Allergen V5/Tpx-1 family signature 152 165 IPR001283 -
Arst10g00559 169 PRINTS Allergen V5/Tpx-1 family signature 53 71 IPR001283 -
Arst10g00559 169 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 33 166 IPR001283 -
Arst10g00559 169 SUPERFAMILY PR-1-like 31 169 IPR035940 -
Arst10g00559 169 ProSitePatterns CRISP family signature 1. 126 136 IPR018244 GO:0005576
Arst10g00559 169 ProSitePatterns CRISP family signature 2. 152 163 IPR018244 GO:0005576
Arst10g00559 169 SMART SCP_3 32 165 IPR014044 -
Arst10g00559 169 CDD CAP_PR-1 34 169 - -
Arst10g00559 169 FunFam Putative pathogenesis-related protein 1 31 169 - -
Arst10g00559 169 Gene3D CAP 32 169 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00559 Arst-Chr10 4646763 4647724 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00559 K13449 - gmx:100805116 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00559 10 4646763 4647724 Arst10g00559 10 4646763 4647724 ECH