Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00552 ATGAAAATAAGTGTGGGGCGAATAATAAGTTTTGTAAGTGTACTCTTTTGGTGTGTATCGGCTCAAAATTCTGAAGATGATTATCTTAAGGTTCACAACGCGGCGCGCAAAGGAGTTGGGGTTAAACCACTGAAATGGGACAAGGAGCTAGAATCATATGCTCGTGCGCACTTGAATAAGCATGTTGAAGATTGCAAGCTGGAGTCATCGGACGGTCCTTACGGCGAGAACTTAGTGCGTGGAACTGGTATTTGGAAAAACCTTACTGGAAAAGAAGCTGTTGAATTGTGGGTGTCAGAAAAACAATACTACGATGAGAAATCCAACTCGTGCTTAGGTGGTGATGATGGTGACGACTATAAATGTTTTGGTTATACTCAGGTTGTTTGGAGTACCACTACACATGTGGGTTGTGCTAGAGTTAGGTGCTACAATGGATCGATCATGGTTAGTTGTAACTATAACCCTCCAGGGAACTACAGAGATAAACGACCCTATTAA 501 0.4232 MKISVGRIISFVSVLFWCVSAQNSEDDYLKVHNAARKGVGVKPLKWDKELESYARAHLNKHVEDCKLESSDGPYGENLVRGTGIWKNLTGKEAVELWVSEKQYYDEKSNSCLGGDDGDDYKCFGYTQVVWSTTTHVGCARVRCYNGSIMVSCNYNPPGNYRDKRPY 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00552 166 ProSitePatterns CRISP family signature 2. 149 160 IPR018244 GO:0005576
Arst10g00552 166 SMART SCP_3 23 162 IPR014044 -
Arst10g00552 166 PRINTS Allergen V5/Tpx-1 family signature 122 138 IPR001283 -
Arst10g00552 166 PRINTS Allergen V5/Tpx-1 family signature 44 62 IPR001283 -
Arst10g00552 166 PRINTS Allergen V5/Tpx-1 family signature 93 106 IPR001283 -
Arst10g00552 166 PRINTS Allergen V5/Tpx-1 family signature 149 162 IPR001283 -
Arst10g00552 166 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 26 162 IPR001283 -
Arst10g00552 166 SUPERFAMILY PR-1-like 13 166 IPR035940 -
Arst10g00552 166 Pfam Cysteine-rich secretory protein family 29 154 IPR014044 -
Arst10g00552 166 CDD CAP_PR-1 26 166 - -
Arst10g00552 166 Gene3D CAP 22 166 IPR035940 -
Arst10g00552 166 FunFam CAP, cysteine-rich secretory protein, antigen 5 22 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00552 Arst-Chr10 4532303 4532803 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00552 K13449 - sind:105172617 176.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00552 10 4532303 4532803 Arst10g00552 10 4532303 4532803 ECH