Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00363 ATGGCGTTGAAGCTTGTTAGCAGAGTGGTGGCGCAAATTGCGAACACGAGAAGCAGATCATACTACACGAGCAGGACGAAGAAGCTAAGCCTTTACTCCAAGATTAGCCCACTTGGAAACCCTACCACAAGCATGGAACCCGAGCTCGACGATTGGGTCTACAAGGGTAACAAGGTTCGAGTTGGAGAGCTTCAGCGCATCGTTCGCGACCTTCGCAAGCGCAGGAGGTTCGCCCAGGCACTCGAGGTATCTGAGTGGATGAATAAGAATGGTGTGTGCATATTTTCTCCAGTTGAACATGCAGTGCATTTGGATTTGGTTGGCAAGGTTCATGGATTTCAGTCTGCTGAATGCTATTTTGACAGCTTGAAGGACCAAGACAAAATTGATAAGACATATGGTGCTCTCTTGAATTGCTATGTTCGCCAGCGCCAAATTGAGAAGGCTCTCTCCCATTTCCAGAAAATGAAGGAGCTGGGGTTCGCTTCGACACCTCTAACCTACAACGATATTATGTGTTTGTACACAAATATTGGACAGCATGAGAAGGTCCCCAATGTGTTAACTGAGATGAAAGAAAACGGGATTTTGCCTGACAACTTCAGCTACAGAATATGTATAAATTCTTATGGCGTGAGGTCTGATGTCACTGAAATGGAGAGAATATTGAAAGAGATGGAGAGTCAACCGCACATTTTGATGGAGTGGAACACTTATTCTGTTGTGGCTAATTTCTATATAAAAGCAGGGTTCGAGGGTAAGGCAGTTGATGCTTTAAGGAAATCTGAGGAGAGGCTAGATAACAAAGATGGTATCGGTTACAATCATCTCATCTCTCTTTATGCACAACTGGGCAACAAGAATGAGGTCCTAAGAGTATGGGAGTTGGAGAAAAGTTCTTGCAAAAGATGCTTAAACAGGGATTTTACAACCATGTTAGAATCTCTGGTGAAGCTCGGTGAGCTGGACGAAGCAGAGAAAATACTGAAGGAATGGGAATCCTCTGGCAACTGTTACGATTTTTCAGTCCCAAACACTATAATCATTGGGTACGCAGAGAAGGGTTTGTATGAGAAGGCTGAAGCCATGCTGGAAGATTTACAGAACACTGGAAAGGTGACGACTCCGAACAGTTGGACTGTGGTGGCAGGTGGATACCTGCATACGGGTGAGATGGAGAAAGCTTTGAGGTGCCTTAAAACAGGTCTGTCTTTGTATGTTGACAATAAAGGATGGAAGCCAAACCCCAAGGTGATCTCTGGTGTATTGAGATGGATTGGTGACAATGGAACTGTCACAGACGCAGAAAATTTAGTGAGTTCATTAATAAATGTTGTCCCAGTAAATAGACAAATGTACCATGCCCAAATCAAGACTTACATTAGAGAAGGTAAAGAAGTGGATGGACTTTTGGACAGCATGAAAAAAGACAACATTGATGAAAACGAAGAAACTAGGGAAATTGTTCAAATGAGGAAGCTGTAG 1485 0.4357 MALKLVSRVVAQIANTRSRSYYTSRTKKLSLYSKISPLGNPTTSMEPELDDWVYKGNKVRVGELQRIVRDLRKRRRFAQALEVSEWMNKNGVCIFSPVEHAVHLDLVGKVHGFQSAECYFDSLKDQDKIDKTYGALLNCYVRQRQIEKALSHFQKMKELGFASTPLTYNDIMCLYTNIGQHEKVPNVLTEMKENGILPDNFSYRICINSYGVRSDVTEMERILKEMESQPHILMEWNTYSVVANFYIKAGFEGKAVDALRKSEERLDNKDGIGYNHLISLYAQLGNKNEVLRVWELEKSSCKRCLNRDFTTMLESLVKLGELDEAEKILKEWESSGNCYDFSVPNTIIIGYAEKGLYEKAEAMLEDLQNTGKVTTPNSWTVVAGGYLHTGEMEKALRCLKTGLSLYVDNKGWKPNPKVISGVLRWIGDNGTVTDAENLVSSLINVVPVNRQMYHAQIKTYIREGKEVDGLLDSMKKDNIDENEETREIVQMRKL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00363 494 Gene3D Tetratricopeptide repeat domain 40 171 IPR011990 GO:0005515
Arst10g00363 494 Pfam PPR repeat family 167 210 IPR002885 -
Arst10g00363 494 Gene3D Tetratricopeptide repeat domain 375 493 IPR011990 GO:0005515
Arst10g00363 494 Gene3D Tetratricopeptide repeat domain 186 307 IPR011990 GO:0005515
Arst10g00363 494 FunFam Pentatricopeptide repeat-containing protein mitochondrial 61 272 - -
Arst10g00363 494 NCBIfam pentatricopeptide repeat 167 199 IPR002885 -
Arst10g00363 494 NCBIfam pentatricopeptide repeat 132 161 IPR002885 -
Arst10g00363 494 NCBIfam pentatricopeptide repeat 309 339 IPR002885 -
Arst10g00363 494 Pfam PPR repeat 309 336 IPR002885 -
Arst10g00363 494 Pfam PPR repeat 345 368 IPR002885 -
Arst10g00363 494 Pfam PPR repeat 378 400 IPR002885 -
Arst10g00363 494 Pfam PPR repeat 132 161 IPR002885 -
Arst10g00363 494 Pfam PPR repeat 274 295 IPR002885 -
Arst10g00363 494 SUPERFAMILY TPR-like 236 406 IPR011990 GO:0005515
Arst10g00363 494 Gene3D Tetratricopeptide repeat domain 308 373 IPR011990 GO:0005515
Arst10g00363 494 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 164 198 IPR002885 -
Arst10g00363 494 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 129 163 IPR002885 -
Arst10g00363 494 PANTHER OS12G0527900 PROTEIN 26 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00363 Arst-Chr10 2994339 2996505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00363 30 477 EF-hand Containing Proteins AT1G02150 33.766 1.56e-83 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00363 - - gmx:100805658 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00363 10 2994339 2996505 Arst10g00363 10 2994339 2996505 ECH