Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00348 ATGGATTCACACATTGCTGATTCGGACTGGGAGACCTCCAGTGACAGCAGCAGCAGCGATGATCAAGAGGATATTGATTTTTTATATGGTGGGAAAGCTTGCAGCATATTATCCAGTTTAGAAGAAAGCATTGAAAAAATTGATGATTTTCTCTCATTTGAGAGGGCATTTGCTCATGGGGATGTGGTCTGCTCGTTGTCAGATCCATCTGGACAGATGGGTAGGGTTGTAAGTGTTGATATGTCTGTCGATTTGGAAAATGTTCAGGGAAACATACTGAAAAATGTAAACTCCAAGAAACTTCTGAAGATTCGCTCCATTTCAGAAGGTGATTTTGTGGTCAAGGGACCATGGCTTGGTCAAGTTCAAAAGGTGGTGGATAGAGTGACTGTATTGTTTGATGATGGAGCAAAATGTGAGATTATCGCATTGGAAAAAGAGAAGATTTTACCAATCAGTCAAAGTTTTCTTGAGGATTCACAGTATCCATACTATCCAGGACAAAGAGTAAAGGTTAAGTCTTCCACTGTTTCTAAATCGGCTAGATGGCTTTGTGGCACTTGGAGAGACAATCAAGATGAAGGAACTGTATATGCTGTGGATGCTGGTCTTGTTTATGTTAAATGGATCGCTTCTGTTCTTGGATTCAATTCTAATGTCAATGTCAATGCTCCCACCTGCTGGCAAGATTCCAAAAACTTGACCTTGCTGTCGTGTTTTTCGCATGTAAACTGGCAGCTTGGTGATTGGTGCATGCTCCCTATCGCAGACCAAAAGAAAGAGATGTTTCAAGATTCTTCTACGAGTGATATTTCTGCTGAACATAGTATGGCAAGAGGATATAAGAGAAGAAACCTCAACTCTAGTATTGGGGAAATATTCATAGTTGGGAAGATAAAGACTAAAGTGGATGTTGTGTGGCAAAATGGGGAACATACTTTGGGATTAGACCCACAGAACTTAGTCCCAGTTAATGTCATAAACACTCATGAGTTTTGGTCTCAGCAGTTTGTAATGGAGAAAGGAGCTTCTGATGATCCTCTTAAGCCTAGCAGTCAAAGATGGGGTGTTGTTCAATCTGTCGACGCAAAAGAGCGTACGGTAACAGTACAATGGACACATTATTCCTGTTGTTTCGATGATATTGTGTTCAAGGCTCAGAAACAGATTGATTCCCAAGCTGATAAGGATAATGCGAAGTCAGTGACTGACTTGAATGGAGATGATCCTCTGAGAGGCAAGGATGAAATCAGTGATCAGAATAAGTTCCCTGATGACTTCTACCTGTCTTGTTTTGGTAATGTTGTAGGTTTCGAAGATGGTGATGTTGAGGTGAAATGGGCTACTGGTTTAACAACCAAGGTTGTACCTTATGAAATTTTTCGCATTGATAAACATGAAGATTCAACTGCAACCCCTGTTCCTAATGAAGTAAATGTTGAGGAGTTATCTCATGAGATGATTGTACATGAAAGTCTTCCTTCTGACCAGAAGGGAAAGGACTTATTAAATTGTGATAGTGGTAGAGGGAATCATGAAAAGCATCCAGGAGAGTGCAGTTCCTTTTCTATTCCTCAAGCTGCAATTGAACTTTTTTCAAGCATTAAAACCAGCATATTCCAAACATTTGGTGTAACTTCACTTTATGGAGCAGTTTCCCGAGTCCCTACATTTGAAGAGGAAAAAGGAACCAATTTTCTTGAAAAGAAAGATTTCGAAACTTGTGGTCCCTTCCCCGAGTCAACTCCAGTGAGTGGGTTGGAGACAAATGAAGACAAACTTCCATATTTTGAGTTCGTTAAGATTCATGAGAGAAATGATTCTCCAGTTTCTTTAGATAGCAATAGTTCTGATCAGTTAAAGCAGTTTGATATGATAGATAATTGCTCAGACCACCACTTTTTTGATAAGGGAAAAGGGTTGGCGATATCTCAGGTAAAAAGAGATTGGGTGAAAAAGGTTCAGCAAGAATGGAGCATCCTGGAGAAAAATCTTCCTGAAACTATTTATGTCCGTGTTTTCGAAGAAAGAATGGATCTCATGAGAGCAGCCATTGTGGGTGCGTCTGGGACGCCTTATCATGATGGGCTCTTCTTCTTTGACATATGTTTTCCTCGAGAGTATCCCAGTGAACCACCTATGGTGCACTACCATTCTGGTGGGCTCAGATTAAATCCTAATTTGTACGAATCGGGGAAAGTGTGTCTGAGTCTCCTGAATACATGGACCGGCACGGCCAGCGAAGTGTGGAACCCTGCATCCTCCACAATCCTTCAAGTCCTTCTCTCCCTGCAGGCCCTTGTCCTTAATGAGAAACCTTATTTCAATGAGGCCGGATATGATCAACAAATTGGAAGAGCCGAAGGAGAGAAAAACTCGGTCAGTTACAATGAAAATGCTTTTCTTGTTACCTGCAAATCGATGTTGTATCTGTTGAGAAAGCCACCCAAGCATTTTGAGGCACTGGTGGAAGAGCACTTTAGACAACGCTCGTGTCATATACTTTCTGCCTGTAAGGCATATCTCGAAGGCGCTCCCATCGGAGGAACTTTTGGTTCTGGAAAATCCGAGGATGAAAACCAGAAGGGGACTTCTACAGGATTCAAAATTATGCTGGCTAAGCTCTTCCCCAAGCTTGTCGAGGCATTTTCTGATAAGGGAATTGATTGCAGCCAGTATATTGAGCTGCAAAAATAA 2697 0.4142 MDSHIADSDWETSSDSSSSDDQEDIDFLYGGKACSILSSLEESIEKIDDFLSFERAFAHGDVVCSLSDPSGQMGRVVSVDMSVDLENVQGNILKNVNSKKLLKIRSISEGDFVVKGPWLGQVQKVVDRVTVLFDDGAKCEIIALEKEKILPISQSFLEDSQYPYYPGQRVKVKSSTVSKSARWLCGTWRDNQDEGTVYAVDAGLVYVKWIASVLGFNSNVNVNAPTCWQDSKNLTLLSCFSHVNWQLGDWCMLPIADQKKEMFQDSSTSDISAEHSMARGYKRRNLNSSIGEIFIVGKIKTKVDVVWQNGEHTLGLDPQNLVPVNVINTHEFWSQQFVMEKGASDDPLKPSSQRWGVVQSVDAKERTVTVQWTHYSCCFDDIVFKAQKQIDSQADKDNAKSVTDLNGDDPLRGKDEISDQNKFPDDFYLSCFGNVVGFEDGDVEVKWATGLTTKVVPYEIFRIDKHEDSTATPVPNEVNVEELSHEMIVHESLPSDQKGKDLLNCDSGRGNHEKHPGECSSFSIPQAAIELFSSIKTSIFQTFGVTSLYGAVSRVPTFEEEKGTNFLEKKDFETCGPFPESTPVSGLETNEDKLPYFEFVKIHERNDSPVSLDSNSSDQLKQFDMIDNCSDHHFFDKGKGLAISQVKRDWVKKVQQEWSILEKNLPETIYVRVFEERMDLMRAAIVGASGTPYHDGLFFFDICFPREYPSEPPMVHYHSGGLRLNPNLYESGKVCLSLLNTWTGTASEVWNPASSTILQVLLSLQALVLNEKPYFNEAGYDQQIGRAEGEKNSVSYNENAFLVTCKSMLYLLRKPPKHFEALVEEHFRQRSCHILSACKAYLEGAPIGGTFGSGKSEDENQKGTSTGFKIMLAKLFPKLVEAFSDKGIDCSQYIELQK 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00348 898 SUPERFAMILY UBC-like 644 818 IPR016135 -
Arst10g00348 898 Gene3D Ubiquitin Conjugating Enzyme 612 890 IPR016135 -
Arst10g00348 898 SMART ubc_7 652 809 - -
Arst10g00348 898 MobiDBLite consensus disorder prediction 1 22 - -
Arst10g00348 898 CDD UBCc 651 804 IPR000608 -
Arst10g00348 898 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 649 809 IPR000608 -
Arst10g00348 898 MobiDBLite consensus disorder prediction 395 418 - -
Arst10g00348 898 FunFam Probable ubiquitin-conjugating enzyme E2 23 611 887 - -
Arst10g00348 898 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 6 890 - -
Arst10g00348 898 Pfam Ubiquitin-conjugating enzyme 654 800 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00348 Arst-Chr10 2926298 2932539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00348 21 894 Miscellaneous Gene Families AT2G33770 48.575 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00348 K10581 - gmx:100784814 1347.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00348 10 2926298 2932539 Arst10g00348 10 2926298 2932539 ECH