Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00180 ATGATGGAATCTAGTGTTCAGTTGTGCAATTCTTGTGGGGAACAAATTGGAGTTGATGCTAATGGAGAGGTGTTTGTGGCTTGTCATGAGTGCTATTTTCCAATCTGCAAAGCTTGTTTTGATTATGAAATGAATGAGGGTCGCAAAGCTTGTCTGAGATGTGCTACTCCCTATGAAGAAAGATCCAAAAATGATGATGACACCAAGGTTAATGGAAATCGGTCAACATCAATGGCTTCTGAGCTCAGTATTTCTCAGGATGTTGGAATCCATGCTAGGCATGTCAGTACTGTGTCCACAGTGGATAGTGAGTTAAATGATGAATATGGGAATCCAATCTGGAAAAATAGAGTGGAGAGCTGGAAGGAGAAGGATAAGAAGAAAAACAAGAAGAAAAAGGCTGAACCTAAGGCCGAAAATGCGGCACCAATTCCACCGGAACAGCAGATGGAAGAAATACAGTCCTCAGAGGCTGCTGCTGCTGAGCCACTCTCAATTACTATTCCAATATCGAAAACAAAAATGGGACCATACAGATTTGTGATAATCATGCGTCTGATAATCTTAGGTCTCTTCTTCCATTACCGAGTCACAAATCCTGTTGACAGTGCTTTTGCTTTGTGGTTGACATCTATCATCTGTGAGATCTGGTTTGCATTTTCATGGGTGTTAGATCAGTTCCCTAAATGGTATCCCATCAACAGGCACACTTTTATTGACAGGCTTTCTGCCAGGTTTGAAAGAGAGGGTGAACCATCTCAGCTTGCTGCTGTGGATTTCTTTGTCAGTACAGTGGATCCATTGAAGGAACCGCCGCTGATCACAGCTAACACAGTGCTTTCTATTCTTGCTGTGGACTACCCTGTGGATAAAGTATCCTGTTATGTGTCTGATGATGGTGCTGCAATGCTTACATTTGAATCCCTTGTGGAGACAGCTGATTTTGCAAGAAAGTGGGTTCCATTTTGCAAGCAGTACTTGATTGAGCCGCGAGCGCCTGAGTTCTACTTCTCTCAGAAGATTGACTACCTCAAAGACAAAATTCAACCTTCTTTTGTGAAGGAACGTAGAGCTATGAAGAGAGACTATGAGGAATATAAAGTAAGAATCAATGCTTTGGTAGCCAAGGCACAGAAAACACCAGAAGAAGGATGGACTATGCAAGATGGAACCCCTTGGCCTGGGAATAACTCACGCGATCACCCTGGCATGATTCAGGTTTTCCTTGGACACACTGGTGCACATGACATAGAAGGGAATGAACTTCCTAGGCTGGTGTATGTTTCCAGAGAGAAAAGGCCAGGTTACCAACATCACAAAAAGGCTGGTGCTGAAAATGCATTGGTGAGGGTCTCAGCAGTTCTCACAAATGCTCCCTTCATTCTCAATCTTGATTGTGATCATTATGTTAACAATAGCAAGGCTGTCCGGGAAGCAATGTGTTTTCTTATGGATCCAGAAGTTGGTAGAGATGTCTGTTATGTGCAGTTCCCCCAGAGATTCGACGGTATTGATCGCAGTGATCGATATGCAAATCGCAACACAGTTTTCTTTGACGTTAACATGAAAGGACTTGATGGAATTCAAGGACCTATGTATGTGGGAACTGGATGTGTTTTCAATAGACAAGCTCTTTATGGTTATAGTCCACCTTCCATGCCCAACTTACCAAGATCTTCTTCATCATGCTGCTGCTGCTGCCCCTCAAAGAAGGCCAAAAAAGATGTCTCTGAGCTTTATAAAGATGCAAAGAGGGAAGAACTTGATGCTGCTATTTTTAATCTTAGGGAGATTGAAAATTATGATGAGTATGAGAGGTCAATGCTGATTTCACAGATGAGCTTTGAGAAAACATTTGGCTTGTCCACTGTTTTCATTGAGTCCACATTGATGGAGAATGGAGGTGTTCCTGATTCTGCAGATCCCTCAATGCTGATCAAGGAGGCCATTCATGTAATTGGCTGTGGATATGAAGAGAAGACTGAATGGGGAAAAGAGATTGGTTGGATTTATGGATCAGTGACAGAGGATATCTTAACTGGATTCAAGATGCACTGTAGAGGATGGAGATCAATTTACTGCATGCCATTAAGGCCAGCATTCAAAGGGTCAGCTCCAATCAACTTGTCTGATAGGTTGCACCAAGTTCTTAGGTGGGCCCTTGGATCAGTTGAAATCTTCTTCAGCAGACACTGCCCTTTGTGGTATGGATTTGCAGGTGGACGCCTCAGATGGCTTCAGAGACTAGCTTACATAAACACCATTGTCTATCCTTTCACATCACTTCCTCTTGTTGCTTATTGTTCCTTGCCAGCAATTTGCCTTCTCTCTGGAAAATTCATCATACCAACGCTATCAAACCTAGCAAGTGTACTCTTTCTTGGACTATTTCTGTCCATCATAACCACCAGCATCTTGGAGCTTCGATGGAGTGGCGTGACCATCGAAGCAATATGGCGAAACGAGCAGTTCTGGGTCATAGGAGGCGTCTCGGCCCATCTCTTCGCCGTCTTCCAAGGTTTCCTGAAGATGTTAGCAGGCATTGACACAAACTTCACAGTCACAGCAAAAGCTGCAGATGACACAGAGTTTGGTGAACTCTACATTATAAAATGGACCACACTCTTGATCCCTCCAACAACTCTGATCATAGTTAACATGGTTGGTGTTGTTGCTGGTTTCTCTGATGCACTCAATGGAGGCTATGAGTCTTGGGGACCTTTATTTGGCAAAGTTTTCTTTGCATTTTGGGTTATTTTTCATCTGTATCCATTCCTCAAAGGTCTAATGGGTCGCCAGAACAGAACACCAACCATTGTTATACTTTGGTCAGTGTTGTTGGCATCAGTCTTCTCTCTTGTTTGGGTTAAGATCAATCCCTTTATCAGCAGAACTGACAGCTCAACCATCTCAGGGACTTGCATTTCCATTGATTGTTAA 2940 0.431 MMESSVQLCNSCGEQIGVDANGEVFVACHECYFPICKACFDYEMNEGRKACLRCATPYEERSKNDDDTKVNGNRSTSMASELSISQDVGIHARHVSTVSTVDSELNDEYGNPIWKNRVESWKEKDKKKNKKKKAEPKAENAAPIPPEQQMEEIQSSEAAAAEPLSITIPISKTKMGPYRFVIIMRLIILGLFFHYRVTNPVDSAFALWLTSIICEIWFAFSWVLDQFPKWYPINRHTFIDRLSARFEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFESLVETADFARKWVPFCKQYLIEPRAPEFYFSQKIDYLKDKIQPSFVKERRAMKRDYEEYKVRINALVAKAQKTPEEGWTMQDGTPWPGNNSRDHPGMIQVFLGHTGAHDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPEVGRDVCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPMYVGTGCVFNRQALYGYSPPSMPNLPRSSSSCCCCCPSKKAKKDVSELYKDAKREELDAAIFNLREIENYDEYERSMLISQMSFEKTFGLSTVFIESTLMENGGVPDSADPSMLIKEAIHVIGCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYGFAGGRLRWLQRLAYINTIVYPFTSLPLVAYCSLPAICLLSGKFIIPTLSNLASVLFLGLFLSIITTSILELRWSGVTIEAIWRNEQFWVIGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAADDTEFGELYIIKWTTLLIPPTTLIIVNMVGVVAGFSDALNGGYESWGPLFGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVILWSVLLASVFSLVWVKINPFISRTDSSTISGTCISIDC 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00180 979 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 410 549 IPR029044 -
Arst10g00180 979 SUPERFAMILY Nucleotide-diphospho-sugar transferases 272 772 IPR029044 -
Arst10g00180 979 Pfam Zinc-binding RING-finger 3 61 IPR027934 -
Arst10g00180 979 FunFam Cellulose synthase 375 549 - -
Arst10g00180 979 SUPERFAMILY RING/U-box 2 65 - -
Arst10g00180 979 Coils Coil 356 376 - -
Arst10g00180 979 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 81 IPR013083 -
Arst10g00180 979 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 162 944 - -
Arst10g00180 979 MobiDBLite consensus disorder prediction 120 143 - -
Arst10g00180 979 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 162 944 - -
Arst10g00180 979 Pfam Cellulose synthase 258 969 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst10g00180 979 Pfam Cellulose synthase 258 969 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00180 Arst-Chr10 1715795 1720489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00180 1 979 Glycosyltransferase AT4G18780 82.234 0.0 1672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00180 K10999 - gmx:100806522 1790.39