Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00144 ATGGCAACAACAACAATAGGCATCACCTATATTATTATTCTTGTTGCATGTTTTCTCTCTTCATCATCAGATATTGGAGTTGAATCATTCGGAATCAACTACGGGCAAGTAGCAAACAATCTACCAGAGCCAGAGAAAGTGCTAACACTGTTGACCACCCTAAGGATCACAAAGACAAGAATCTACGACACCAACCCTGACATTTTGAGGTCTTTTGCAAACTCCAACATGGACTTAATCGTGACGGTGGAGAACGAGATCCTAAGCCAACTGGACGATCCACAAGCGGCGTCTCAGTGGGTCAGCACCCGCATACTGCCGTACCTACCGGAAACAAAGATCACCGGAATTCAGGTTGGAAACGAAGTCTTCACCGACGACGACACTACTCTCATCCAGCACCTTGTCCCTGCAGTCATCAACATCCACAACGCTCTCACCAAAGCTGGCTACTCCAACATCCAAGTCTCCACGCCCAGTTCTCTGGCGGTTCTGGATGAGTCTTACCCTCCTTCTGCCGGCACCTTCAAGGCCGAGATATCTACCATCATGTACCAGTTCTTGAACTTCCTCTCAACAACCAAGACCCCCTTTTGGATCAATGCATACCCATACTTTGCATACAAAGACGAGCCCGATCAGATTCCACTCGACTACGTTCTCTTCAATCCCAACTCGGGAATGGTTGATCCCAACACCAAGCTTCGCTACGACAACATGCTCTATGCAATGGTGGACGCTGTTTACTTCGCCATTGCCAAGATGGGCTTCAAGGGGATCGAGGTCAGAGTCTCTGAAACCGGTTGGCCTTCCAAGGGTGACGTAGACGAAGCTGGTGCAACTCCGCAGAATGCTGCTACTTACAATCGAAACTTGTTGAGGAGGCAAATGGCCAATGAAGGCACACCTTTGAATCCCAGGATGAGGTTGGAGGTTTACTTGTTTGCATTGTTCAACGAAGATTTGAAGCCTGGACCTACCTCTGAAAGAAACTATGGTCTCTTTCAACCTGATGAGTCTATGACTTACAATGTAGGCTTCTCTGCTCTTGCAACCACATCTTCATCTTCATCGCCATCTTCTTCGTCTTCTTCCTCCGCCTCCTTTTCCCTTGCCTCACATGCCACTCACACTAAGGTAGTTCACACGGGATACCATCAAAGCTTCATGTGCTGGATGTTTGTGTATTGGGTAATTTCAGCTCTTTATGTGTGA 1215 0.4757 MATTTIGITYIIILVACFLSSSSDIGVESFGINYGQVANNLPEPEKVLTLLTTLRITKTRIYDTNPDILRSFANSNMDLIVTVENEILSQLDDPQAASQWVSTRILPYLPETKITGIQVGNEVFTDDDTTLIQHLVPAVINIHNALTKAGYSNIQVSTPSSLAVLDESYPPSAGTFKAEISTIMYQFLNFLSTTKTPFWINAYPYFAYKDEPDQIPLDYVLFNPNSGMVDPNTKLRYDNMLYAMVDAVYFAIAKMGFKGIEVRVSETGWPSKGDVDEAGATPQNAATYNRNLLRRQMANEGTPLNPRMRLEVYLFALFNEDLKPGPTSERNYGLFQPDESMTYNVGFSALATTSSSSSPSSSSSSSASFSLASHATHTKVVHTGYHQSFMCWMFVYWVISALYV 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00144 404 SUPERFAMILY (Trans)glycosidases 30 346 IPR017853 -
Arst10g00144 404 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 19 369 IPR044965 GO:0004553|GO:0005975
Arst10g00144 404 Gene3D Glycosidases 28 354 - -
Arst10g00144 404 FunFam Glucan endo-1,3-beta-glucosidase 14 28 353 - -
Arst10g00144 404 Pfam Glycosyl hydrolases family 17 31 347 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00144 Arst-Chr10 1382336 1384574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00144 8 371 Glycoside Hydrolase AT4G18340 63.562 9.90e-178 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00144 - - aip:107624442 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00144 10 1382336 1384574 Arst10g00144 10 1382336 1384574 ECH