Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00040 CCAGCTTCATCAATCCACAAAAACGACGCCGTCCGCCTCAATCACTGCTCCTCCTCCTCTTCCAACGCCGTCTTCCACAACGCCGAGGAACCTTCTACCTCGAATTCTACGGTTTCGGATCCTCAACCCCTTTCATCACAACCTCCAATTTCGCATCCCCAACGACCTTCTCCGGCCGCCAGAATCCGCCGCCGGAAAATTAATCGTGATTCCCAGGGCAAGGAACCGGAAATTTCACCTCCCGATTCTTTCCTCACTTCCGAGAGCAGCGATTTCACCAATGGCGCTAAAAGCAGCTCCCGAAATCACAGAGGCCCTCGAACATCAACAAAGGAAGAGGAAAGTCCTGCCGAGAAATGCGATTCGAACGAAGCAAAACGTCAACGCGCTCGCGCAGTTCAAGTTTCAAGTTCCGTGAAAGAAGATAACAATGTGAACAACGAGGAGTCGACGGTTACCACAGCTTCGAAAGACGACTCGCCGGGGGATTCAGCCGAGTCACCGATTCAACACGGCAACTCGTCCTCGAGTTTCCTCGAACTAGTTGCAGGGCTTGTAATTAAGGCGATCGCATTCGAAATCAAGCTAGTCACGATGTTTGTGACGTATCCGCTATTGTTCGCGTTTCAATGTTGCATGTTTTGCGTGGACCCATTGGGGACGACGAAAAAGGGCAAGGCTTTCGTGACAGGAGTTTTGGCGAGAGTGCGTGGCGCTGTTTATGGTCGTGTGGGGCATTACTTCAAGGGTTGGTTCAACGAGAACGATTCAGTTTGGAGCTTGGCGCTTCGTTGCGGGTGGGGTTTGTTGTGGTCGATCTACGTTTGTTTCGTCTTGTTTGGGCTCTTGGTTAATTCTTTTGTGGTGAGTGGGCTTTTGATGAAGTGCTTTGTGGAGAAGCCGATTCGGACGAGGGAAGTTTTGAACTTTGATTTCACTAAGCATAGCCCTGTGGCTTATGTGCCCATAATTTCGTGTGATGCTGTTTTTGGTGGAAAATATTCTGAGAATTTGAACAACGACGTTGGTGGTACCAATACCAAGTGGAGGGGTCAACGTTTTATACCTTATAAGCACAAAGTGCAAGTCACTCTCTTGTTGACAGTTCCTGAGTCAGGATACAACAGAGATCTTGGGGTCTTTCAGGCCAGAGTTGATTTCCTATCGGCTGATGGTAGAACCATGGCAAGCTCAAGTAAACCTTGCATGTTAAGATTCAGCAGTGAGCCTATACGATTGATCATGACTTTCCTCAAGATTGCTCCTCTTGTAACTGGTTATATGGCCGAAACCCAGACTCTGAACGTCCATATGAGAGGTTTCATTGAAGGGGATGAACCTACTTCGTGCCTGAAGGTGACACTTGAGCAGCGAGCTGAATATCAACCTGGCGCTGGCATTCCTCAGATATACGATGCATCTGTGGTTATTGAGTCCCAACTTCCATTCTTTAAGAGGATTATTTGGGTTTGGAAGATGAGCATATTCATATGGATCACGATGATGGTATTCATAATTCAGTTACTTTTTGTTCTATTGTGTTGTAGACCTGTAATTATTCCTAGAACAAGGCAAAGAGTTAGCAGACCTGCAACCCAAAATAATCATCAGGTACAAAATTTAGCAAGGCATCCTAAATTCTAA 1644 0.4696 MDSPASSIHKNDAVRLNHCSSSSSNAVFHNAEEPSTSNSTVSDPQPLSSQPPISHPQRPSPAARIRRRKINRDSQGKEPEISPPDSFLTSESSDFTNGAKSSSRNHRGPRTSTKEEESPAEKCDSNEAKRQRARAVQVSSSVKEDNNVNNEESTVTTASKDDSPGDSAESPIQHGNSSSSFLELVAGLVIKAIAFEIKLVTMFVTYPLLFAFQCCMFCVDPLGTTKKGKAFVTGVLARVRGAVYGRVGHYFKGWFNENDSVWSLALRCGWGLLWSIYVCFVLFGLLVNSFVVSGLLMKCFVEKPIRTREVLNFDFTKHSPVAYVPIISCDAVFGGKYSENLNNDVGGTNTKWRGQRFIPYKHKVQVTLLLTVPESGYNRDLGVFQARVDFLSADGRTMASSSKPCMLRFSSEPIRLIMTFLKIAPLVTGYMAETQTLNVHMRGFIEGDEPTSCLKVTLEQRAEYQPGAGIPQIYDASVVIESQLPFFKRIIWVWKMSIFIWITMMVFIIQLLFVLLCCRPVIIPRTRQRVSRPATQNNHQVQNLARHPKF 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00040 550 MobiDBLite consensus disorder prediction 85 106 - -
Arst10g00040 550 MobiDBLite consensus disorder prediction 13 48 - -
Arst10g00040 550 MobiDBLite consensus disorder prediction 108 131 - -
Arst10g00040 550 MobiDBLite consensus disorder prediction 1 176 - -
Arst10g00040 550 MobiDBLite consensus disorder prediction 132 176 - -
Arst10g00040 550 Pfam Putative adipose-regulatory protein (Seipin) 285 507 IPR009617 GO:0019915
Arst10g00040 550 PANTHER BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN 174 533 IPR009617 GO:0019915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00040 Arst-Chr10 713250 716167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00040 K19365 - gmx:100796452 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00040 10 713250 716167 Arst10g00040 10 713250 716167 ECH
Arst10g00040 10 713250 716167 Arst3g06186 3 134897391 134900051 ECH
Arst3g06186 3 134897391 134900051 Arst10g00040 10 713250 716167 PCT