Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3150 ATGGATTCTGCTTTAGTGATCAAGGTGAAATATGGAGATACCCTCAGGCGCTTCAGTGCTCATGTGGACGAGAATAATCAACTGGATCTTGACATGATTGGGTTGAGGGCCAAGATATGTTCTATCTTCAATTTCACTGCTGATGCAAATCTAATTCTGAGATATGTTGATGAAGATGGCGACTTAGTGACTCTGGTGGATAATGAAGATTTACGTGATGTTATGAGGCAGCAATTGAAGTACTTGAAAATTGATGTGCATGTGAGCAATGACATTGGTGGTCAATCAAATACTGGGTCTAGTGGAAGTGCCACGCCCTCAAAATCTCCTCCTGTCTTAAACTCATTTCTGGTTAGAGATTCTTTAGTACCATATCCTCTGCCAGAGCCAGTACGTGAGGCTCTTTCTAAATTATCACTTCCAAAAGCTGCATCATCAAGTCCTGTGGTTGCAAATCTTGCCGAGGCAATTCCAAAAATGGGACAAGCTGTTCTAAATTCTCTTTTCCAGCCTCACAATGCAGCTGGTACAAGGCCAAAAACTGGTGTTCCTGAAGAATCTATCTCTTCTGAAGCAAGAGGTTCTCAGTCTCCTCATGTGGACTCAGCTTCCAATGCCAGTGTCCACACTGATAGTTCCACACCCTTAAGATCGCCTGTTCCAGATCCATTTCTGAGTGGAAATGCTGTTAAAGTTGACGAATCAGATGGTGTGAGAAAACCACTACGCCAGTTTGTTTCCAATGTATCACGTTCAAATGCAGAACTTTCAGGTCAAACATCTAGTATTTATGCTAATTTTATTTCCAAAATGGGACAACCTGTTTCAAATTCTCATTTCCAGCCTCATGTTGCAGCCAATCCTAGCTCAAGAAATGGCATCTCTGAAGAATCCATCACTTCTGAAGCAAGTCTGCAACCTCCATATGTGAACCCAGCTTCCAATGCCAGTGTCCAGAGTGATCGTGCCACCCTCTTGAGATCTGCTGCTCCAGATCCTTTTCTGAGCAGAAATGCTGTTAAAGTTGAACACTCTGTGCCTGAGCCAGTACAGGAGTTTTGGTCCAAATTATTATCACATTCAAGAGATACATCTGCTATTCAGCCTGGTGTTAATCTTGCTGATTTTATTTCCCTAGTGGGAGAAACTGTTCTAAATTCTTATTGGCAGCCTAATGTTGCAGCTGGCCCTAGCTCAAAAAATGGTGTTCCTGAAGAACCTGTCACTTCTGAAGCAAGAGGTCCACAGTCTCCATCTGTAGACTTGGCTTCCAATGCCAATCAACAAGTGGAGGCTGGAAATGTAATTAGAGGTGTAACAACAGGTGCAAGAGTTGCCTCTGTTGATCTCAATATCCTTCCATGTGATCCCTCTTCATCTCAGAACACACATGCAAGTAGAGATCCACTTTCATCTGCAGTCCCTGGTGATGGCAACATGGGTAAAATGTCTACTGATGATAGTTTTCTTGGAAAGGGTGACAGTAGTGGGGCGTCCTCAAGTTCTGCAGGTCCTATTAACAGCTCAACCCAAACTCGTGCATTGAGTCCTGGTGCTTTCATTGAGTGTCCATTTTCTGGGACATATCCTATTAATTCTGGGAGACCAACTCTTGGAAACCTTCGACTTCCCTCATTTAAAAGAAGCCATAGTCACACTGAGGCAACGACTGGTATGTTCCATAAGGGGGTCCGCTGTGATGGCTGTGGAGTCTATCCAATAACTGGACCCCGTTTCAAATCCAAAGTAAAGCAAAATTATGACCTCTGCAACATTTGCTTCAATGAAATGGGTAATGAGACTGATTATATCAGAATGGACCGCCCTGCATCTGTTCGTGTCCCTCGATGTGTATATGAATATCCATTAAACCTTCCAACATTACCGCCACATATTTTTAAAAAAGGTGCAATTTCAAAGCATGCAAGGCAAAAGCTAGATAGTCGGTTCATTTTGGATGTTAATGTTATAGATGGTACAATGATGGCTCCATCTACTGCATTTACAAAGATCTGGCGGATGCGCAATAATGGCACTATAGTGTGGCCCAAGGGAACTCAGCTTGTCTGGATTGGAGGGCACAAGTTTAGTGACTCTCATTCAGTTGACTTGGAGGTTCCCGAGGATGGTGTGCCTGTGGAGAAGGAACTTGACATTGCAGTTGACTTTACTGCACCTCAGTTACCGGGTCGATACGTATCGTACTGGAGGATGGCATCTCCATCTGGACATAAATTTGGCCAACGTGTTTGGGTCCTTATACAGGTTGATGCCTCTCTCAAGGACTCATTTTATGATAGCTCTCAAGGTCTGAACTTGAATATCCCCCTTGACGTAAATGACTCTAAAGGGCCTCAGGTTATAGATATCAATGTCCAACCTGCTGAGGATGATATTTTTCTTCAAACCCACAATCCTAATGCTCCCATTGAACCTGGGAATCAAGTGGTTGACAAGGAACCAAGGCTGGAGCTGGAAAAAGAATTCCCTATAAATGAAGCTACATTTGTTGGCCCTGCTGCGTCATCCCCTGCAACCTCTGTGGCACCTTCATCTTTTTCGTATCCTATTATTGATTTGTCTGAAACAGCCCCGACTGTTCCCTCTAACCAGCAATCCTCAACTGTGGATGTGCCTTCGTCGTCTATGGGGGTTGGTGGCATTAATTCTGTGGAGGAAACTCTACTTAAAGAGCTTGAGGAGATGGGTTTTAAGCAGGTTGATTTGAACAAAGAGATCTTGAGGATGAATGAGTATGATTTGGAGCAATCAGTAGATGATCTCTGTGGTGTTTCTGAGTGGGACCCTATGCTTGAAGAGTTACGTGAGATGGGTTTCCGTGACAATGAGATGAATAAGAGGCTGCTGAAGAAAAACAATGGAAGCATCAAGCGTGTTGTTATGGATTTAATCAACGGAGAGTAG 2925 0.4356 MDSALVIKVKYGDTLRRFSAHVDENNQLDLDMIGLRAKICSIFNFTADANLILRYVDEDGDLVTLVDNEDLRDVMRQQLKYLKIDVHVSNDIGGQSNTGSSGSATPSKSPPVLNSFLVRDSLVPYPLPEPVREALSKLSLPKAASSSPVVANLAEAIPKMGQAVLNSLFQPHNAAGTRPKTGVPEESISSEARGSQSPHVDSASNASVHTDSSTPLRSPVPDPFLSGNAVKVDESDGVRKPLRQFVSNVSRSNAELSGQTSSIYANFISKMGQPVSNSHFQPHVAANPSSRNGISEESITSEASLQPPYVNPASNASVQSDRATLLRSAAPDPFLSRNAVKVEHSVPEPVQEFWSKLLSHSRDTSAIQPGVNLADFISLVGETVLNSYWQPNVAAGPSSKNGVPEEPVTSEARGPQSPSVDLASNANQQVEAGNVIRGVTTGARVASVDLNILPCDPSSSQNTHASRDPLSSAVPGDGNMGKMSTDDSFLGKGDSSGASSSSAGPINSSTQTRALSPGAFIECPFSGTYPINSGRPTLGNLRLPSFKRSHSHTEATTGMFHKGVRCDGCGVYPITGPRFKSKVKQNYDLCNICFNEMGNETDYIRMDRPASVRVPRCVYEYPLNLPTLPPHIFKKGAISKHARQKLDSRFILDVNVIDGTMMAPSTAFTKIWRMRNNGTIVWPKGTQLVWIGGHKFSDSHSVDLEVPEDGVPVEKELDIAVDFTAPQLPGRYVSYWRMASPSGHKFGQRVWVLIQVDASLKDSFYDSSQGLNLNIPLDVNDSKGPQVIDINVQPAEDDIFLQTHNPNAPIEPGNQVVDKEPRLELEKEFPINEATFVGPAASSPATSVAPSSFSYPIIDLSETAPTVPSNQQSSTVDVPSSSMGVGGINSVEETLLKELEEMGFKQVDLNKEILRMNEYDLEQSVDDLCGVSEWDPMLEELREMGFRDNEMNKRLLKKNNGSIKRVVMDLINGE* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3150 974 MobiDBLite consensus disorder prediction 172 232 - -
Apr9g3150 974 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 924 973 IPR015940 -
Apr9g3150 974 SUPERFAMILY RING/U-box 554 612 - -
Apr9g3150 974 ProSiteProfiles Zinc finger ZZ-type profile. 561 611 IPR000433 GO:0008270
Apr9g3150 974 SUPERFAMILY CAD & PB1 domains 3 80 - -
Apr9g3150 974 MobiDBLite consensus disorder prediction 188 219 - -
Apr9g3150 974 MobiDBLite consensus disorder prediction 489 511 - -
Apr9g3150 974 CDD NBR1_like 644 757 IPR032350 -
Apr9g3150 974 MobiDBLite consensus disorder prediction 864 884 - -
Apr9g3150 974 PANTHER PROTEIN JOKA2 1 164 - -
Apr9g3150 974 PANTHER PROTEIN JOKA2 204 974 - -
Apr9g3150 974 Gene3D - 1 88 - -
Apr9g3150 974 Pfam Ig-like domain from next to BRCA1 gene 655 756 IPR032350 -
Apr9g3150 974 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 890 928 IPR015940 -
Apr9g3150 974 MobiDBLite consensus disorder prediction 279 316 - -
Apr9g3150 974 Pfam PB1 domain 6 87 IPR000270 GO:0005515
Apr9g3150 974 SMART PB1_new 4 89 IPR000270 GO:0005515
Apr9g3150 974 Pfam Zinc finger, ZZ type 561 596 IPR000433 GO:0008270
Apr9g3150 974 MobiDBLite consensus disorder prediction 393 421 - -
Apr9g3150 974 Gene3D Immunoglobulins 640 760 IPR013783 -
Apr9g3150 974 Gene3D - 553 608 IPR043145 -
Apr9g3150 974 SMART zz_5 560 605 IPR000433 GO:0008270
Apr9g3150 974 PANTHER OVARIAN CARCINOMA ANTIGEN CA125-RELATED 1 164 - -
Apr9g3150 974 PANTHER OVARIAN CARCINOMA ANTIGEN CA125-RELATED 204 974 - -
Apr9g3150 974 SUPERFAMILY UBA-like 934 972 IPR009060 GO:0005515
Apr9g3150 974 MobiDBLite consensus disorder prediction 457 511 - -
Apr9g3150 974 CDD UBA_NBR1 933 971 - -
Apr9g3150 974 Gene3D - 933 973 - -
Apr9g3150 974 Gene3D - 884 932 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3150 K17987 - gmx:100778692 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3150 9 38301948 38306992 Apr9g3150 9 38301948 38306992 ECH