Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3125 ATGGTTCGCAGAATGGCAAGCCTTCCTCGAAGCATAATGGGTAGCATTTCAAGGGCAATGGGGGATGGTATGGGGTTTGTGGGCATAGGTAGAAGAAGAAATCAGCATACAAATATTCCATTACAGCCTCAAGTTCTTTCACAGCCACATGGTCATCATCAACTAGTAGTTCCTGAGGAATGGGCTTTTCTAGAGTGTTTTGAGCAGCAATATGGCACCAAACATCCTTTCTTTTATGCTTTTCGTTTCTCGGAAGCAATGAAGTTAGCAGAGAAAGATCACAAGTTCGTATTTATGTATCTTCATTCACCTGATCACCCTTTTGCTAACGTTTTCTGCAAGGAAACCCTGTGTTCAGAGTTCGTGTCCCAGTTTCTTGATGTGAATTTTGTTTGTTGGGGGGCACTTGCAGATAGAGGAGATGGCTTGCAAATGGTTGCAACGCTAAGCCCTGGTAGCTTTCCCTGTTGTGCTGTCATAGCACCCGCTCCTGGTGATAGCATAGCAGTGTTGCAACAGCTAGAGGGACCTCTTTCACCAGCTGAGCTAGTGGAGATTCTACAAAGAACATTGGAAGAACAAGGGGTGGCTTTTGGAAGTGCTAAAGCTAAGCAGGAAGCAAAGATCCAAGCAGACCGTAGGCTCAGAGAAGAACAAGACGCTGCATATCTTGCAGCTTTGCAAATAGACAAGGAAAAAGACAAGCTCCATAATTTACCTTCAAGAGAGTTAGTTCAGAAGCCAGTGGTAGCTCAAAACACCACAAATTATGGGAAGATGGGGAACAATTCTATTAAAGTCAGTAAACAGCGTAGCAAAGTGAATGAATCTACTAGTGAAAAACAAGACAAAGGAAATGCAAATAGAGGAAGCGAGTCTCAATCCACACAGATACTCATAAGGTTTCCAAACGGTGAAAGAAGAGAACATACTTTCCTTTACACAGACAAAATCCAGTCCATTTTCTCATACATTGATTCATTAGGTTTGCCAGGGATTGGAAACTACAGATTGATATCAAACTTCCCAAGAAGAGCCTATGGGGTTGATCAAATGAGAATGACTCTTAAAGATGCTGGCTTGTATCCTAAAGCTAGCATGTTCCTTGAGCCTTTGTGA 1119 0.4263 MVRRMASLPRSIMGSISRAMGDGMGFVGIGRRRNQHTNIPLQPQVLSQPHGHHQLVVPEEWAFLECFEQQYGTKHPFFYAFRFSEAMKLAEKDHKFVFMYLHSPDHPFANVFCKETLCSEFVSQFLDVNFVCWGALADRGDGLQMVATLSPGSFPCCAVIAPAPGDSIAVLQQLEGPLSPAELVEILQRTLEEQGVAFGSAKAKQEAKIQADRRLREEQDAAYLAALQIDKEKDKLHNLPSRELVQKPVVAQNTTNYGKMGNNSIKVSKQRSKVNESTSEKQDKGNANRGSESQSTQILIRFPNGERREHTFLYTDKIQSIFSYIDSLGLPGIGNYRLISNFPRRAYGVDQMRMTLKDAGLYPKASMFLEPL* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3125 372 MobiDBLite consensus disorder prediction 255 297 - -
Apr9g3125 372 PANTHER FAS-ASSOCIATED PROTEIN 1 371 - -
Apr9g3125 372 PANTHER UBIQUITIN-ASSOCIATED (UBA) PROTEIN-RELATED 1 371 - -
Apr9g3125 372 SMART 45neu3 62 188 IPR006577 -
Apr9g3125 372 MobiDBLite consensus disorder prediction 255 272 - -
Apr9g3125 372 Gene3D Glutaredoxin 59 197 - -
Apr9g3125 372 Gene3D - 290 371 - -
Apr9g3125 372 CDD UAS 78 193 - -
Apr9g3125 372 Pfam UBX domain 292 370 IPR001012 GO:0005515
Apr9g3125 372 ProSiteProfiles UBX domain profile. 291 369 IPR001012 GO:0005515
Apr9g3125 372 SUPERFAMILY Thioredoxin-like 57 196 IPR036249 -
Apr9g3125 372 CDD UBX 298 370 - -
Apr9g3125 372 MobiDBLite consensus disorder prediction 273 287 - -
Apr9g3125 372 SUPERFAMILY Ubiquitin-like 288 371 IPR029071 -
Apr9g3125 372 SMART ubx_3 290 371 IPR001012 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3125 Apr-Chr9 38055745 38057785 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3125 K18726 - gmx:100775212 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3125 9 38055745 38057785 Apr9g3125 9 38055745 38057785 ECH