Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3123 ATGAAGAAGCGAAAGGCATTGAGCGTGGTGGTCAACGCGATGTGTTTGGTTATGGTTTGCAGTGCGATCGAATCTCCGCAATACACAGTTCTACACAGCGAGTCCGATTTCGAGATCAGGCTCTATCGAACCTCCGTTTGGATGTCCGCTCCTGCCCTCGACATATCCTTCGAGAAAGCCACATGGAACGGCTTCCATAGGTTGTTCCAGTTCACAGAAGGTGCGAACCTGAATTTCTCTCGAATCCCGATGACCGCTCCGGTGTTGACGAGCATGGTCCCTGGGGCTGGGCCTCTTCAATCCCAAGGCTATTACGTTAGTTTGTACTTGCCTGTTAAGTTCCAAGCGAGTCCACCTGTTCCGCTTCCCGAACTCAATATTAAGCCCTATGAATTCACCATCCACTGCGTTGCGGTGAGAAAGTTTTCTGGTTTTGCCAAGGATAATAGGATTGTGAAAGAGGCGGAAAAACTTGCCACTAGTTTGAGTAGGTCTCCTTGGGCAGATTCAACTTCGTCCATCACTCAGCGTGCTTACTCAATTGCACAGTACAATACTCCGTTCCGAATTGTTAATCGCAAAAATGAGGTTTGGGTCGATATTCATGCTCCTGAATTGGGCTGTGAGTCGGTTGCTGTTTCTGCTTATTGA 651 0.4839 MKKRKALSVVVNAMCLVMVCSAIESPQYTVLHSESDFEIRLYRTSVWMSAPALDISFEKATWNGFHRLFQFTEGANLNFSRIPMTAPVLTSMVPGAGPLQSQGYYVSLYLPVKFQASPPVPLPELNIKPYEFTIHCVAVRKFSGFAKDNRIVKEAEKLATSLSRSPWADSTSSITQRAYSIAQYNTPFRIVNRKNEVWVDIHAPELGCESVAVSAY* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3123 216 Gene3D Regulatory factor, effector binding domain 22 205 IPR011256 -
Apr9g3123 216 PANTHER HEME-BINDING PROTEIN-RELATED 7 202 IPR006917 -
Apr9g3123 216 Pfam SOUL heme-binding protein 23 199 IPR006917 -
Apr9g3123 216 PANTHER SOUL HEME-BINDING PROTEIN-RELATED 7 202 - -
Apr9g3123 216 SUPERFAMILY Probable bacterial effector-binding domain 13 201 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3123 Apr-Chr9 38041602 38042500 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3123 - - gmx:100306073 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3123 9 38041602 38042500 Apr9g3123 9 38041602 38042500 ECH