Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3115 ATGGCGAAAGCGAGCGACGCAGGCGTCGAAGCCCTACGGCGCCTGAAAGCCACGGATCCACCGTCATGGCTCGCCCCGAACCCGTCGCTGTCTGAAACTGCTCGCATTGCATCGCAGTACTTGTTCTCTTCCCTCAGACCCTTCGCCCCCAAATCGCCGTTGGACCAACTCCTCGTCGAAGGCTTCGACGCCGAGCAGATATGGCAGCAAATCGACCTCCAATCGCAGCCACTGTTATCAACCCTTCGCCGCCGGTTGAAGAAGCTAGCAAAAAATCCCGAAGCGATTTCTCAGCTGAAGGTTCCTTCGGAGGTTGGGAACAAGGAAGATGAAAAGAATCGAGCCGAGTGGGACGATGAGAGCGACGGTTTTGATGAGGAGTTGGATGAAGTAGACGAAGATGAAGATGAAGAAAGGGTAGAAAAAGAGGACAAAGGAGAAGGAGACGAAGAAGATGATGAAAAGATGGAGGATGAAGATGAGGAGAGTGAAGAGAGAGAGGAGGAGAATGATGAAGGTGCTGGCATCGAGGATAAATTCTTGAAAATAGATGAATTGGCTAAGTACTTGGAGAAGGAGGAAGAGAATTTGGAGAATGAAGAGGCAGGTAAGGAGGAAGATGACGATGATGAAGACACTGACAATGATGACGAGGAAAGTGATGAGGCTGGTGGTTTTGGGATTGGTGACAATGATGATGAAGATGAAGAAGCAGATGTCATCGGAAATGCAAGGTATGAAGACTTCTTTGGAGGTAAAAAGGGAAAAGGCTCAAAAAGAAAAGCTCAGTTACTTCAGGAATCTGAAGATTCTGGTGATGATGACATGGAATTTGACAAACAGGAGAAAGGGAGTGCTTCTGCCTATGAAAAGCAACTAGAAAAAATTCAATCCAAGATAGAGCAGATGGAGAAAGCTAACATAGAGCCAAAAACTTGGACTATGCAGGGTGAGGTAACTGCTGCAAAGAGACCGAAGAATAGTGCATTGGAGGTTGATCTGGACTTTGAGCATAATGTAAGGCCTGCTCCTGTAATCACTGAGGAGGTTACAGCTTCAATTGAGGATGTAATCAAGAAAAGGATTATTGAGGGGCATTTTAATGATGTTCAAAGGATTCCTAAATTACCATCTAAAGTACCTCGAGAAGTTAAAGAGTTGGATGAGAATAAAAGCAAGCAGGGTCTTGCAGAAATTTATGAGCAAGAATATGTTCAGAAGATAGACCCCAGTTCTGCACCAATGTCATTCAAAGATGAACAAAAGAATGAGGCAAGCATGCTGTTTAAGAGACTCTGTCTGAAGCTAGATGCCCTTTCTCATTTTAACTTTGCTCCAAAACCTGTTATAGAAGACATGTCTATTCAAACTAATGTACCTGCTCTGGCAATGGAAGAAATTGCACCGGTGGCTATTTCAGATGCTGCTATGCTGGCTCCAGAGGAGGTATTTGATGGCAAGGGTGATATTAAGGAAGAAGTAGAGCTTACTAAGGCAGAAAGGAAAAGAAGGAGAGCTAATAAGAAAAGAAACTTTAAAGCTGAGGCAGTAAAAAGGACAGAAAAGAAGGCACGAGAAGGGGCATTTCATAGCCAAGTTAATGCTATGTTGTATTGGTCTGTATATCGCTAA 1632 0.4436 MAKASDAGVEALRRLKATDPPSWLAPNPSLSETARIASQYLFSSLRPFAPKSPLDQLLVEGFDAEQIWQQIDLQSQPLLSTLRRRLKKLAKNPEAISQLKVPSEVGNKEDEKNRAEWDDESDGFDEELDEVDEDEDEERVEKEDKGEGDEEDDEKMEDEDEESEEREEENDEGAGIEDKFLKIDELAKYLEKEEENLENEEAGKEEDDDDEDTDNDDEESDEAGGFGIGDNDDEDEEADVIGNARYEDFFGGKKGKGSKRKAQLLQESEDSGDDDMEFDKQEKGSASAYEKQLEKIQSKIEQMEKANIEPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRPAPVITEEVTASIEDVIKKRIIEGHFNDVQRIPKLPSKVPREVKELDENKSKQGLAEIYEQEYVQKIDPSSAPMSFKDEQKNEASMLFKRLCLKLDALSHFNFAPKPVIEDMSIQTNVPALAMEEIAPVAISDAAMLAPEEVFDGKGDIKEEVELTKAERKRRRANKKRNFKAEAVKRTEKKAREGAFHSQVNAMLYWSVYR* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3115 543 Coils Coil 183 210 - -
Apr9g3115 543 MobiDBLite consensus disorder prediction 104 119 - -
Apr9g3115 543 MobiDBLite consensus disorder prediction 173 197 - -
Apr9g3115 543 Pfam Mpp10 protein 50 518 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Apr9g3115 543 Coils Coil 286 309 - -
Apr9g3115 543 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 2 526 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Apr9g3115 543 PIRSF snoRNP_Mpp10 229 535 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Apr9g3115 543 PIRSF snoRNP_Mpp10 9 263 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Apr9g3115 543 MobiDBLite consensus disorder prediction 120 172 - -
Apr9g3115 543 MobiDBLite consensus disorder prediction 198 241 - -
Apr9g3115 543 MobiDBLite consensus disorder prediction 93 290 - -
Apr9g3115 543 MobiDBLite consensus disorder prediction 249 268 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3115 K14559 - gmx:100781093 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3115 9 37960263 37966331 Apr9g3115 9 37960263 37966331 ECH