Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3099 ATGACCACCCAATCGCCACCGCCTTCCACTCCCCCCGACACTGACGAAAACCAAGGTTCTAAAGTTGTGCAACCAACAAATGTGGATCAGCAAAATGTCAAAGAGGAGCCTGTTAAACAGAGTTCATCTACATCAGTCTTTGTTAATTCACAACCATTGCGGGAAGAACAAGTTCAGAATGCTGTGAAATTTCTATCACACCCAAAAGTTAGAGGTTCACCTGTCATCTATAGGCGATCATTTCTGGAGAAGAAGGGCCTTACAAAGGAGGAGATTGATGAAGCCTTTCAGCGGGTGCCAGATTCTGCTCCAACTGTGCAGACAGCTGGTGTAAATCAAGATGGGCAACTGAAATCATCATCAAACATTCAGCAACAAGCCCAACAACAAACTTTGCAGCCGGGTTTACCTGCTTCTACTGGTGTTAATTCTTCATCAGGAAGTTTATCACGGCCCAGATTTCACTGGTCCCATGCCCTTATTGCTGTTGGATTACTGGCTGCTTCAGGAGCTGGAACAGCTATAGTAATTAAGAATTCCATTCTCCCTCGGTTAAAATCTTGGATACGTAAAGTTGTCTTAGATGAAGATGATGAACAAATAAGGAAAAATGACAAAAAACCAACGCTGGTGGAAGAAGCTGCACAAGCTGCAAAATCAGCTGCAGCTGCAGCTGCAGATGTGGCAAAAGCAAGCCAAGAAATGTTGGCTTCAAAAGGTGAAGAGAGGAGATACTTTCTGGAAGTTGTGAGTCTTTTAGATAAGCAAGTACAAGAAATGAAGTCAATGACAAATGCAATAAGAAGATTGGAAGGTCAAGAAGATCTTAGAGTCAGTCAAACAAGTTCAAAGCAACTGATTGTGAATGGCAAAGCAGACTATGACTTGCGTTCAGTGAGATCTTCATCCCCACCTGCATCTGTTGAACCATCAGGTGGTCTTCATCCAAAGTCATATATGGAGATAATGGCCATGGTCCAAAGAGGAGAGAAGCCTTCTAATATTAGAGATATCAATGATTTACCCCCCAACCCTAATCAAGAACCATCAAATCCACGCTTAGTGCCTAGATCCAAGCCTTGGGAGGTTGGTCAGGTGCAAAACATTTCTACCCAAATGCTTGAGTCTCAAGTAAATGGTGAAGACTTGAATATCAAGACCCAAGACACCACTCAATTGAATGGGGATGACCCATTGCCCTGGTGGCAGAGAAAAAATGTTAGAATCAGAGAGATTGATGATGAAAATGAGTCTAATGGAGCACCCTATGGTGCTGCATCCAGTCAGCAGCCAGTCCAACGTGTGTGGGTTCCTCCTCAACCTCCTCCGATAGCCATGCCGGAGGCTGCTGAAGCAATCAGACGCCCAAAGTCAGTGATCCAAAAGGAGCAGATGTCAGATAATCAGTCAGTAGCTCATTCTTCAGATGTCTCTGATGAGGTGCATAGGACCCCACAACTATTGGAATCTGAAGGTGCGGTAGAGGGCAACAGTGTCAGCTCAGTTCTCAGCTCTGGTGAGATACAAGAAGTCGAAGACCATGAAGTGAAATATGAAGAGAAATAA 1566 0.4419 MTTQSPPPSTPPDTDENQGSKVVQPTNVDQQNVKEEPVKQSSSTSVFVNSQPLREEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFQRVPDSAPTVQTAGVNQDGQLKSSSNIQQQAQQQTLQPGLPASTGVNSSSGSLSRPRFHWSHALIAVGLLAASGAGTAIVIKNSILPRLKSWIRKVVLDEDDEQIRKNDKKPTLVEEAAQAAKSAAAAAADVAKASQEMLASKGEERRYFLEVVSLLDKQVQEMKSMTNAIRRLEGQEDLRVSQTSSKQLIVNGKADYDLRSVRSSSPPASVEPSGGLHPKSYMEIMAMVQRGEKPSNIRDINDLPPNPNQEPSNPRLVPRSKPWEVGQVQNISTQMLESQVNGEDLNIKTQDTTQLNGDDPLPWWQRKNVRIREIDDENESNGAPYGAASSQQPVQRVWVPPQPPPIAMPEAAEAIRRPKSVIQKEQMSDNQSVAHSSDVSDEVHRTPQLLESEGAVEGNSVSSVLSSGEIQEVEDHEVKYEEK* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3099 521 Pfam Pex14 N-terminal domain 54 98 IPR006785 -
Apr9g3099 521 MobiDBLite consensus disorder prediction 437 521 - -
Apr9g3099 521 MobiDBLite consensus disorder prediction 413 432 - -
Apr9g3099 521 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 10 502 - -
Apr9g3099 521 MobiDBLite consensus disorder prediction 1 53 - -
Apr9g3099 521 Gene3D - 42 106 IPR036388 -
Apr9g3099 521 Coils Coil 253 273 - -
Apr9g3099 521 MobiDBLite consensus disorder prediction 14 53 - -
Apr9g3099 521 MobiDBLite consensus disorder prediction 333 358 - -
Apr9g3099 521 Pfam Family of unknown function (DUF5572) 315 363 - -
Apr9g3099 521 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 10 502 IPR025655 GO:0005515|GO:0005778|GO:0016560
Apr9g3099 521 MobiDBLite consensus disorder prediction 491 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3099 Apr-Chr9 37806685 37813868 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3099 K13343 - gmx:100786361 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3099 9 37806685 37813868 Apr9g3099 9 37806685 37813868 ECH
Apr9g3099 9 37806685 37813868 Apr1g0817 1 10364536 10370528 PCT