Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3088 ATGGTTAACAGTGAAGTAATTAGAACCGTCGTTGGAATAATTGGAAATGTAATCTCTTTTGGTTTATTCATGTCTCCTGTGCCTACATTTGTAAAAATATGGAAGGCAAAATCAGTGCAAGATTTCAAGCCAGATCCTTATGTTGTGACTATACTCAATTGTGCAATGTGGGCATACTATGGAATGCCCTTCGTAACTAAAAGTAACGTTCTTGTGCTCACAATTAATGCATTCGGCTTCGTGCTTGAGATCGTTTACACTTGTATCTTCTTCGTATTCTCAAACTGGAGCAAGCGTAAAAGGATCCTCCTAGTCCTCCTGGTTGAAGTCATCTTCATTGCTATGGTGGTTTTTGTAACCTTGCACTTTGTTCACACCCTCAAGCGAAGAAAGTTGGTTGTTGGACTTATATGCATAATCTTCAACATCCTCATGTACTGTTCACCCTTGACCGTCATGCGACGAGTAATTCGAACAAAGAGCGTGAAGTACATGCCTTTCCTACTTTCACTCGCTAATTTTGCCAATGGAATCGTCTGGACGACCTATGCACTCCTCAAGTGGGATCCATTCATCGTGATTCCAAATGGGTTGGGAGCACTTTCGGGGTTGGTGCAGCTGATCCTGTATGGCATTTACTACCGAACAACGAACTGGGAAGAAGAAACCCCTACTCGCCCCAGCGTATGA 690 0.4275 MVNSEVIRTVVGIIGNVISFGLFMSPVPTFVKIWKAKSVQDFKPDPYVVTILNCAMWAYYGMPFVTKSNVLVLTINAFGFVLEIVYTCIFFVFSNWSKRKRILLVLLVEVIFIAMVVFVTLHFVHTLKRRKLVVGLICIIFNILMYCSPLTVMRRVIRTKSVKYMPFLLSLANFANGIVWTTYALLKWDPFIVIPNGLGALSGLVQLILYGIYYRTTNWEEETPTRPSV* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3088 229 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET5 5 224 - -
Apr9g3088 229 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Apr9g3088 229 Pfam Sugar efflux transporter for intercellular exchange 10 95 IPR004316 GO:0016021
Apr9g3088 229 PANTHER RAG1-ACTIVATING PROTEIN 1 5 224 - -
Apr9g3088 229 Gene3D - 6 100 - -
Apr9g3088 229 Gene3D - 129 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3088 Apr-Chr9 37677151 37678988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3088 1 194 Miscellaneous Gene Families AT5G62850 58.247 4.28e-87 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3088 K15382 - gmx:100810948 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3088 9 37677151 37678988 Apr9g3088 9 37677151 37678988 ECH