Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3077 ATGGGAGATAAAAAACGCAAGAGAGGCCGCAAGCCCAAAAGCCCCGCCCCCGAAACCCTAGACTTCTCCGCCAACGTCGCCACCACCGCACCAAACGCCACCGCCACCACCACTGCAATGGACGACGTCTTCTCCGTCGGAAGCGTTGAACTCATCGATAACACCGCCTCTGCGCACCACCATCGCCGCCGTGGCCGCCCCAAGAAGCTCCCCAACCACTCCGACAAGCCTGTCTCTCTCGCCACGGGGCGCCGCCTCGCCCGCTCGGTGGACAACGGGGGCGACTTCCCCGTCCCCGGCGACGGAGGTATCTCCCCCGCCGCGCCCATGGAAGCGGCGGACCCGGTGTGGGAGAGCGTGTCGGCGAGGGTGTTACCGGCGATGGACTCGGTGGTGAAGGTGTTCTGCGTACACACGGAACCGAATTTCTCGCTGCCATGGCAGAGGAAGAGACAATGCAGTTCGAGTAGCAGTGGGTTTGTGATTGGTGGGAGAAGGGTTCTCACCAATGCGCATTCGGTGGAGCACTACACTCAGGTCAAGCTCAAAAAGCGTGGCTCCGATACGAAGTACTTGGCCACTGTGCTTGCCATTGGAACCGAGTGTGACATTGCCATGCTTACAGTTGATGATGATGAGTTCTGGCAAGGGATGTCATCTGTAGAGTTTGGGGAGTTGCCCACACTTCAAGATGCAGTTACTGTCGTGGGCTACCCAATTGGTGGAGACACTATCTCTGTGACTAGTGGTGTTGTATCGCGCATTGAGATTCTACCTTATGTCCATGGCTCCACAGAACTTCTAGGTTTACAGATAGATGCTGCTATAAATTCTGGCAATTCTGGTGGACCTGCATTTAATGATAAAGGAAAGTGTGTGGGGATTGCATTTCAGTCCCTCAAGCATGAAGACGTGGAGAATATAGGTTATGTCATTCCAACACCAGTTATCATACATTTCATCAAGGATTATGAGAAAAATGGAGGATATACTGGGTTCCCTATTCTTGGGGTTGAGTGGCAGAAAATGGAAAATCCTGATCTACGAATGGCAATGGGCATGAGACCTGATCAGAAAGGTGTGCGTATTAGAAGAATTGATCCTACTGCTCTAGAATCTAAGTTTTTGAAGCCATCAGATGTTATCCTTAGCTTTGATGGAGTTGATATTGCCAATGATGGAACTGTTCCATTTCGTCATGGAGAACGCATTGGTTTCAGTTATCTCATATCCCAGAAATATACTGGAGATAATGCTGCAATAAAAGTAATGCGAAATTCAGATATTTTCAAATTTGACATTAAACTTGATAGTCACAAAAGACTTATTCCAGTACACAGCAAGGGCAGGCCTCCCTCTTATTATATCATTGCAGGATTTGTGTTTACAACTGTTTCAGTTCCATATCTTCGTTCTGAGTATGGAAAAGATTACGAGTATGAAGCTCCAGTCAAGCTTTTGGATAAACTGCTGCATTCAATGCCACAATCACCAGATGAACAGCTTGTTGTGGTCTCTCAGGTTCTGGTGGCCGATATCAACATTGGATACGAAGATATTGTTAACACCCAGGTTCTTGCTTTCAATGGTAAACCTGTGAAAAATCTTAAGAGCTTGGCCACTATGGTGGAGGACTGCAATGATGAATATCTAAAATTTGAACTAGATTATGATCAGATAGTGGTTCTTCGGATGAAGACTGCAAAAGCAGCTACCCTCGATATTCTTGCAACACATTGCATTCCATCAGCAATGTCTGATGATCTGAAGTCATGA 1776 0.4786 MGDKKRKRGRKPKSPAPETLDFSANVATTAPNATATTTAMDDVFSVGSVELIDNTASAHHHRRRGRPKKLPNHSDKPVSLATGRRLARSVDNGGDFPVPGDGGISPAAPMEAADPVWESVSARVLPAMDSVVKVFCVHTEPNFSLPWQRKRQCSSSSSGFVIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVDDDEFWQGMSSVEFGELPTLQDAVTVVGYPIGGDTISVTSGVVSRIEILPYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIIHFIKDYEKNGGYTGFPILGVEWQKMENPDLRMAMGMRPDQKGVRIRRIDPTALESKFLKPSDVILSFDGVDIANDGTVPFRHGERIGFSYLISQKYTGDNAAIKVMRNSDIFKFDIKLDSHKRLIPVHSKGRPPSYYIIAGFVFTTVSVPYLRSEYGKDYEYEAPVKLLDKLLHSMPQSPDEQLVVVSQVLVADINIGYEDIVNTQVLAFNGKPVKNLKSLATMVEDCNDEYLKFELDYDQIVVLRMKTAKAATLDILATHCIPSAMSDDLKS* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3077 591 PANTHER - 4 590 - -
Apr9g3077 591 MobiDBLite consensus disorder prediction 1 25 - -
Apr9g3077 591 PANTHER PROTEASE DO-LIKE 9 4 590 - -
Apr9g3077 591 MobiDBLite consensus disorder prediction 55 85 - -
Apr9g3077 591 Pfam Trypsin-like peptidase domain 158 295 - -
Apr9g3077 591 Gene3D - 334 441 IPR036034 GO:0005515
Apr9g3077 591 Pfam PDZ domain 443 588 IPR041517 -
Apr9g3077 591 Gene3D - 110 214 IPR043504 -
Apr9g3077 591 CDD PDZ_serine_protease 334 434 - -
Apr9g3077 591 Gene3D - 225 333 IPR043504 -
Apr9g3077 591 SUPERFAMILY PDZ domain-like 359 441 IPR036034 GO:0005515
Apr9g3077 591 PRINTS HtrA/DegQ protease family signature 159 171 IPR001940 GO:0004252|GO:0006508
Apr9g3077 591 PRINTS HtrA/DegQ protease family signature 187 207 IPR001940 GO:0004252|GO:0006508
Apr9g3077 591 PRINTS HtrA/DegQ protease family signature 229 253 IPR001940 GO:0004252|GO:0006508
Apr9g3077 591 PRINTS HtrA/DegQ protease family signature 266 283 IPR001940 GO:0004252|GO:0006508
Apr9g3077 591 PRINTS HtrA/DegQ protease family signature 375 387 IPR001940 GO:0004252|GO:0006508
Apr9g3077 591 SUPERFAMILY Trypsin-like serine proteases 122 328 IPR009003 -
Apr9g3077 591 Gene3D - 442 591 IPR046449 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3077 Apr-Chr9 37588988 37593807 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3077 K25897 - gmx:100817187 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3077 9 37588988 37593807 Apr9g3077 9 37588988 37593807 ECH