Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3029 ATGATGACGACGCCGTTTCAGCAGCCACCCCAAACCGTTAGGAGACTGGTCGTGGAAGTGGTGGACGCGCGGAACCTCCTTCCAAAGGATGGGCAAGGAAGTTCTAGCCCTTACGTGGTGGCCGACTTCGACGGGCAGAGGAAGCGAACCATCACCCGATTCAAGGAGCTGAACCCCGTCTGGAATGAACAGCTCGAGTTCATCGTCTCTGACCCCGAAAACATGGAGTACGAAGAGCTGGAGGTAGAGGTCTACAACGATAAGAAGTTCGGTAACGGTAGTGGCCGCAAGAATCACTTCCTCGGCAGGGTCAAGCTATACGGAACGCAGTTCTCAAGGAAAGGAGAAGAAGCTCTCGTCTACTACACGCTCGAGAAGAGGAGCGTTTTCAGTTGGATAAGGGGCGAAATTGGCCTCAAGATTTATTACCACGACGAGATGCTTGTTGAAGAAGAGAAACCACCGCCACCGGAGGAGCCAGTTGCCGGAGCAGAGCCGGAGAAGAACAAGCCACCGGGGATGGTTGTTGTCGAGGAAGGAAGGATTTTCGAGGCTCCTGGACCCATGGAGCAATGCGTGCCTCTTCCTCATTCGCCGCGTGTCGTGGTTGTTGAAGAATCGCCGCCGCCGGTGGTTCATGTTCCGCAGGATCCGCCGTTGCCGGAAATGTGTGAACCTCCGGTTTCGGAAATGCAGTTTCATCCTGAGATGAGGAAAATGCAGGCCAATAGAGGGGAGAGGGTGAAGATTTTGAAGAGGCCGAACGGCGATTACTCGCCGAAGGATATCTCCCTGAAGAACGCCGGCGTTGAGTCCGAGAGGGTTCATCCTTTCGATCTGGTGGAGCCAATGCAGTATCTGTTCGTGAAAATCGTGAAAGCTCGCGGGCTCGCTCCTCCAAGCGAAAGCCCATTCGTTAAGGTTCGAACGTCGAGCGACTACAGGAGATCTAAGCCCGCGACCTACCGGCCCAACGAGCACCCAGACTCGCCGGAGTGGAACGAGGTGTTCGCACTGGGATACAACAAGACAGAAGCAAACAGCGCCACGCTAGAGATTTCGGTTTGGGATTCCCCGACGGAGTATTTCCTCGGCGGCGTTTGCTTCGATCTCTCTGACGTCCCCGTGCGAGACCCTCCCGACAGCCCCTTGGCGCCGCAATGGTACCGCCTCGAAGGAGGCACCGCCGATCAAAATCCCGGCAGAGTTTCCGGCGACATTCAGGTCGCCGTGTGGATCGGCACGCAATCCGACGAGGCATTCCCGGAAGCGTGGATCTCAGACGCACCGTACGTGGCGCACACTCGGTCGAAGGTTTACCAGTCCCCGAAGCTCTGGTACCTTCGCGTGACAGTGATCGAAGCCCAAGACCTAAACATCGCTCCGAATCTGCCTCCGTTGACGGCGCCGGAAGTTAGAGTGAAAGTGCAGCTAGGGTTCCAATCGCAGCGAACAAGGCGAGGATCAATGAACCACCGCAGCTTATCGTTCCACTGGAACGAGGACCTTCTCTTCGTGGCCGGGGACCCTCTGGAGGATTCCGTGATCCTTTTCGTCGAAGATCGCACAACCAAGGAAGCGGCGCTGCTAGGGCACATCGTAATTCCGCTCAACTCCGTGGAGCAACGAATCGACGAGCGTCACGTGGCAGCGAAATGGTTCACCCTGGAGGGCGGGTCCTACTGCGGGCGGTTGCACTTGCGCCTCTGCCTGGAGGGCGGGTATCACGTGCTGGACGAGGCGGCGCACGTGTGCAGCGACTTCCGGCCCACCGCGAAACAGCTGTGGAAACCGGCGGTCGGAATTCTAGAGCTGGGGATTCTGGGCGCTCGCGGGCTACTCCCAATGAAATCCAAAGGCACTGGAAAGGGGTCCACCGATGCATACTGTGTGGCAAAGTATGGGAAAAAGTGGGTCCGAACCCGCACCGTAACGGACAGTTTCGATCCACGGTGGAACGAGCAGTACACGTGGCAGGTGTACGACCCTTGCACGGTCTTGACCCTCGGCGTCTTCGACAACTGGCGCATGTTCGCTGACGTGTCAAAGGACAGACCCGATTGCCGCATCGGCAAGGTACGCATACGTGTCTCCACGCTGGAGAGCAACAGAGTCTACACCAATTCCTACCCCCTCCTTGTCCTCACCCGAACCGGGTTGAAAAAAATGGGCGAAATCGAGTTGGCGGTTCGCTTCGCCTGCCCCTCCTTGCTGCCCGACACGTGCGCCGTTTACGGCCAGCCCCTGCTTCCCAGAATGCACTATCTCCGCCCCCTCGGTGTGGCCCAGCAGGAGGCTCTACGCGGGGCAGCCACTAAGATGGTGGCGCAGTGGCTTGCGCGCTCGGAGCCGCCTCTGGGTTACGAGGTGGTTCGGTACATGTTGGACGCCGACTCGCACGCTTGGAGCATGCGGAAGAGCAAGGCGAATTGGTTCAGAATTGTGGCGGTTTTGGCTTGGGCCATTGGGTTGGCTAAGTGGTTAGATGACATCAGAAGATGGAAAAACCCGGTGACCACAGTGCTTCTCCATATTCTTTATTTGGTGCTTGTTTGGTACCCAGATTTAATTGTTCCCACTGGCTTCTTATACGTTGTTCTTATTGGGATATGGTATTACCGCTTCAGACCCAAGATACCCGCTGGAATGGATACCCGCTTGTCACAGGCCGAAGCGGTTGACCCGGATGAGTTGGATGAGGAATTTGACACCATGCCCAGTTCCAAACCACCCGATATTATTCGCCTTCGTTATGACAGGCTAAGGATGCTGGCTGCGCGGGTTCAAACGGTGTTGGGTGATTTTGCAACCCAGGGAGAGAGGGTTCAGGCCCTGGTCAGTTGGAGGGACCCCAGGGCCACCAAGTTGTTCATTGGAGTCTGCCTTGCTATAACCATTACACTCTATGCTGTGCCCCCCAAAATGGTTGCCGTTGCCTTAGGATTCTACTACCTCCGCCACCCTATGTTCCGCAACCCTATGCCCTCCGCCAGCTTGAACTTTTTCCGGCGACTTCCCAGCTTGTCTGATCGGTTGATGTAG 3042 0.5664 MMTTPFQQPPQTVRRLVVEVVDARNLLPKDGQGSSSPYVVADFDGQRKRTITRFKELNPVWNEQLEFIVSDPENMEYEELEVEVYNDKKFGNGSGRKNHFLGRVKLYGTQFSRKGEEALVYYTLEKRSVFSWIRGEIGLKIYYHDEMLVEEEKPPPPEEPVAGAEPEKNKPPGMVVVEEGRIFEAPGPMEQCVPLPHSPRVVVVEESPPPVVHVPQDPPLPEMCEPPVSEMQFHPEMRKMQANRGERVKILKRPNGDYSPKDISLKNAGVESERVHPFDLVEPMQYLFVKIVKARGLAPPSESPFVKVRTSSDYRRSKPATYRPNEHPDSPEWNEVFALGYNKTEANSATLEISVWDSPTEYFLGGVCFDLSDVPVRDPPDSPLAPQWYRLEGGTADQNPGRVSGDIQVAVWIGTQSDEAFPEAWISDAPYVAHTRSKVYQSPKLWYLRVTVIEAQDLNIAPNLPPLTAPEVRVKVQLGFQSQRTRRGSMNHRSLSFHWNEDLLFVAGDPLEDSVILFVEDRTTKEAALLGHIVIPLNSVEQRIDERHVAAKWFTLEGGSYCGRLHLRLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPAVGILELGILGARGLLPMKSKGTGKGSTDAYCVAKYGKKWVRTRTVTDSFDPRWNEQYTWQVYDPCTVLTLGVFDNWRMFADVSKDRPDCRIGKVRIRVSTLESNRVYTNSYPLLVLTRTGLKKMGEIELAVRFACPSLLPDTCAVYGQPLLPRMHYLRPLGVAQQEALRGAATKMVAQWLARSEPPLGYEVVRYMLDADSHAWSMRKSKANWFRIVAVLAWAIGLAKWLDDIRRWKNPVTTVLLHILYLVLVWYPDLIVPTGFLYVVLIGIWYYRFRPKIPAGMDTRLSQAEAVDPDELDEEFDTMPSSKPPDIIRLRYDRLRMLAARVQTVLGDFATQGERVQALVSWRDPRATKLFIGVCLAITITLYAVPPKMVAVALGFYYLRHPMFRNPMPSASLNFFRRLPSLSDRLM* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3029 1013 Gene3D C2 domain 599 735 IPR035892 -
Apr9g3029 1013 CDD C2B_MCTP_PRT_plant 286 415 - -
Apr9g3029 1013 CDD C2C_MCTP_PRT_plant 447 590 - -
Apr9g3029 1013 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 11 1013 - -
Apr9g3029 1013 CDD C2A_MCTP_PRT_plant 15 145 - -
Apr9g3029 1013 ProSiteProfiles C2 domain profile. 267 389 IPR000008 -
Apr9g3029 1013 ProSiteProfiles C2 domain profile. 426 554 IPR000008 -
Apr9g3029 1013 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 15 159 IPR035892 -
Apr9g3029 1013 SMART C2_3c 602 709 IPR000008 -
Apr9g3029 1013 SMART C2_3c 447 549 IPR000008 -
Apr9g3029 1013 SMART C2_3c 286 383 IPR000008 -
Apr9g3029 1013 SMART C2_3c 15 122 IPR000008 -
Apr9g3029 1013 MobiDBLite consensus disorder prediction 151 172 - -
Apr9g3029 1013 Gene3D C2 domain 432 571 IPR035892 -
Apr9g3029 1013 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 601 753 IPR035892 -
Apr9g3029 1013 Pfam Plant phosphoribosyltransferase C-terminal 858 1013 IPR013583 -
Apr9g3029 1013 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 446 592 IPR035892 -
Apr9g3029 1013 Gene3D C2 domain 282 425 IPR035892 -
Apr9g3029 1013 Gene3D C2 domain 11 170 IPR035892 -
Apr9g3029 1013 CDD C2D_MCTP_PRT_plant 602 729 - -
Apr9g3029 1013 Pfam C2 domain 286 389 IPR000008 -
Apr9g3029 1013 Pfam C2 domain 601 712 IPR000008 -
Apr9g3029 1013 Pfam C2 domain 15 109 IPR000008 -
Apr9g3029 1013 Pfam C2 domain 446 556 IPR000008 -
Apr9g3029 1013 PANTHER BNAA10G16860D PROTEIN 11 1013 - -
Apr9g3029 1013 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 286 431 IPR035892 -
Apr9g3029 1013 ProSiteProfiles C2 domain profile. 1 121 IPR000008 -
Apr9g3029 1013 ProSiteProfiles C2 domain profile. 584 710 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3029 Apr-Chr9 37106032 37109939 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3029 1 1013 Lipid Metabolism Gene Families AT1G74720 71.140 0.0 1551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3029 - - gmx:100783882 1854.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3029 9 37106032 37109939 Apr9g3029 9 37106032 37109939 ECH