Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3028 ATGGCCAGCGCAAGAGATAATACAAGGGTTGGAAGCGTACAAACTCCAGTTGTTGAAGAGATAGTACCAAATTCTGGATGGACAGAGGACTCCGCAGGCCATTATCTTCTAGTGGATCTTCCCGATTTCAGGAAGGAAGAGGTGAAGCTTCAGGTTGATAGCTATGGACGTATTCTTGTAAGGGGAGAAAGGCAAGAAAATGAGAGGAAACGTGTTCATTTTCGGCTGACTTTTCCGGTACCAGTGGATTCTGATGTGGATAAGATAGCAGGAAGGTTTGATGGTGGAATCCTTTACGTAACTGTCCCCAAGGGAATAGTACAGCAGCAGAAAGGAAATGAAACTGAGAATGCTGAACATGGTGCAGTTGAAGGAGCAAAAGAAGATGACAGCCCTGCACCCAATGCTGATGAGGGGAGGAGAGATCCCAGTCAACATGGCAACCATACAGAGCAAGAAGTAAAAAGAAATGAAAATCAGGTCATTGGAAATTTTCCTGAGCAAGTAATAAGGATGTGGGAGCAAGATTCCATGTTCAGAAGTGCAGTGGAGGTTTTGATGAAGAACAAAGGAATTGTAATAACAGCTGTTATAGCCTTTTCGTTGGGGGTGTTCATATCTCGTAAAATTTGA 633 0.436 MASARDNTRVGSVQTPVVEEIVPNSGWTEDSAGHYLLVDLPDFRKEEVKLQVDSYGRILVRGERQENERKRVHFRLTFPVPVDSDVDKIAGRFDGGILYVTVPKGIVQQQKGNETENAEHGAVEGAKEDDSPAPNADEGRRDPSQHGNHTEQEVKRNENQVIGNFPEQVIRMWEQDSMFRSAVEVLMKNKGIVITAVIAFSLGVFISRKI* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3028 210 CDD ACD_sHsps-like 27 104 - -
Apr9g3028 210 SUPERFAMILY HSP20-like chaperones 19 108 IPR008978 -
Apr9g3028 210 MobiDBLite consensus disorder prediction 117 156 - -
Apr9g3028 210 MobiDBLite consensus disorder prediction 110 161 - -
Apr9g3028 210 PANTHER INACTIVE PROTEIN RESTRICTED TEV MOVEMENT 2-LIKE 12 210 - -
Apr9g3028 210 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 16 120 IPR002068 -
Apr9g3028 210 PANTHER HEAT SHOCK PROTEIN 26 12 210 IPR045045 -
Apr9g3028 210 Pfam Hsp20/alpha crystallin family 28 110 IPR002068 -
Apr9g3028 210 Gene3D - 3 109 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3028 Apr-Chr9 37102638 37103773 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3028 - - aprc:113874817 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3028 9 37102638 37103773 Apr9g3028 9 37102638 37103773 ECH