Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2986 ATGGGTTCTCCCGCTGAAGATCGTTCAGAGATTGTGTTCTTCGATGTCGAAACCAGCGTTCCGACCCGACCCGGTCAGGGCTTCGCAATTCTCGAATTCGGAGCCATTTTGGTTTGCCCCAGGAAGCTCACGGAGCTCCGAAACTACTCCACTCTCGTCCGACCCGCCAACCTCTCCGTCATCTCGCCGTTGTCGGAGCGATGCAACGGTATCACCCCCGACGCCGTTGCCTCCGCTCCTACTTTCGCCGACATTGCTTACGCCGTCTACGACCTTCTTCACGGGCGAATTTGGGCGGGTCATAATATTTTAAGGTTTGATTGTGTTCGGATCAGAGATGCATTTGCTGAGATAAATCAGGCGCCACCTGAACCGAAGGGTACTGTTGACTCTTTAGTTTTGTTGACTCAGAAGTTTGGAAGAAGAGCTGGTGACATGAAGATGGCTACTCTTGCAACCTATTTTGGGCTTGGACGACAGACACATAGGAGTTTAGATGATGTTCGGATGAATCTCGAAGTCCTCAAATACTGTGCAACGGTTCTATTCTTGGAGTCAAGTCTCCCAGATATATTCACTACAAATTGTTGGATTTCACCAAATGCTACTACAAGAAGCCGTGTTAATGGGAAATCTCCTTCGGAGGGGGGTTTATTAAATATCAATAAGGATTCTGTATTGTTATCATCTCCTGCAGCTGAAAATAAAAGTCATCCAATATCTTATTTGACAATGAGCAACGCAAATGGGGATGTCCCAAATGTTGCAGATCCTAATACAGTTCAGTCGGATCCTTTTAACTTGAGTGCTCTTGAGCATGAAATAACAAGAGAAACTGTTCAGTCAAATGTTGCCATGGAGAGAAAACCCATGCAAGAGTCACCTGATTTGTCTTCCTCGTCTTCTTTGTCTCAGCCTTGCAGCAGCTCTCTTGTTTTAGTACCCGATGAAATATGTATCCCTTCTATTGACGCATCTCTTGTTCCATGTTTCCGAGGCAGTCAAAGGATAGAGTTACTGCACGAAGGTTACCAATTTCAGCTTCATTGTGCTAGTTTGAAAGTGCGTTTTGGAATAAACACAAAGTTTGTTGATAATGCTGGTAGGCCACGATTGAGTTTAGTGGTTGATCCATCACCAAGTTTATGTAATGTTCTGGATGCATGTGACCGTGTTGCACAGAAGTTATCCTCAGATTCTGGTAGCAGCTCTGATTGGAGGCCAGTTGTTATTAGGAAAGAGGGCTTCTTCAACTATCCCACTGTCAGATTGCATATACCTACAGCAGTAGTGGCAGATGTTGCCATTTATGCCACGGAAATATATCAAAGAGAATCGACTGGTGCAGTGCAAAGACTTCTCTTCAGCAAGTTCGATGCTGCAGAACTTGGTTCCTTGTTCATGCCTGGGACGTTTGTTGATGCCTTCTTCTCCTTAGATCCGTATGACTTTCAGCAGAATGCAGGGATTAAATTAGTTTGCAAAAAATTGATCCTTCATTGCAAATAG 1509 0.4473 MGSPAEDRSEIVFFDVETSVPTRPGQGFAILEFGAILVCPRKLTELRNYSTLVRPANLSVISPLSERCNGITPDAVASAPTFADIAYAVYDLLHGRIWAGHNILRFDCVRIRDAFAEINQAPPEPKGTVDSLVLLTQKFGRRAGDMKMATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTTNCWISPNATTRSRVNGKSPSEGGLLNINKDSVLLSSPAAENKSHPISYLTMSNANGDVPNVADPNTVQSDPFNLSALEHEITRETVQSNVAMERKPMQESPDLSSSSSLSQPCSSSLVLVPDEICIPSIDASLVPCFRGSQRIELLHEGYQFQLHCASLKVRFGINTKFVDNAGRPRLSLVVDPSPSLCNVLDACDRVAQKLSSDSGSSSDWRPVVIRKEGFFNYPTVRLHIPTAVVADVAIYATEIYQRESTGAVQRLLFSKFDAAELGSLFMPGTFVDAFFSLDPYDFQQNAGIKLVCKKLILHCK* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2986 502 Gene3D - 5 181 IPR036397 GO:0003676
Apr9g2986 502 PANTHER PROTEIN NEN3 5 501 - -
Apr9g2986 502 CDD DEDDh 12 176 - -
Apr9g2986 502 SUPERFAMILY Ribonuclease H-like 10 180 IPR012337 -
Apr9g2986 502 SMART exoiiiendus 10 184 IPR013520 -
Apr9g2986 502 Pfam Exonuclease 12 175 IPR013520 -
Apr9g2986 502 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 5 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2986 Apr-Chr9 36745647 36748442 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2986 - - ccaj:109808157 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2986 9 36745647 36748442 Apr9g2986 9 36745647 36748442 ECH