Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2984 ATGGGGCAAGAGAATCACAAGAGAAGCAACTTGCCAACCTCAAACGCTCGAAACCGCGGAAACGCGATTCCACGCGGACGGCAGATCCAGAAGACGTTTAACAACATAAAGATCACAATCCTCTGTGGTTTCGTCACCATCCTCGTTCTCCGCGGCACCATCGGCGTGAACCTCGGCTCCTCCGATGCCGACGCCGTCAACCAGAACCTCATCGAAGAGACTAACCGCATCCTCGCCGAGATCCGATCGGACGCCGACCCCTCGGATCCCGACGACCAAACCCCTTTCAACCCTAACGTTACCTTCACCCTTGGCCCCAAGATCTCTAACTGGGACTCTGAGCGCAAATCATGGCTCCTTCAAAACCCTGAATACCCTAACTACATCAGAGGTAAAGCTCGCATCTTGCTTCTCACTGGGTCCCCTCCCAAGCCCTGTGATAACCCCATTGGGGATCATTACTTGTTGAAGTCCATTAAGAACAAGATTGATTACTGTAGATTACATGGGATTGAAATTGTGTATAATTTGGCACATTTGGATATTGAGCTTGCTGGGTATTGGGCCAAATTGCCTATGATTCGGAGGTTAATGTTGTCTCACCCTGAGGTGGAGTGGATTTGGTGGATGGATAGTGATGCTTTTTTTACTGATATGGTGTTTGAACTTCCTTTGTCTAAGTATGATGACTATAATTTGGTTCTCCATGGGTACCCTGATTTGTTGTTCGAGCAAAAGTCTTGGATTGCTGTCAATACTGGGAGCTTTCTTTTCAGGAATTGTCAGTGGTCTTTGGATTTGCTTGATGATTGGGCTCCAATGGGTCCCAAGGGGCCGGTTCGTGAAGAGGCCGGGAAGATCTTGACTGCGAATCTGAAGGGGAGGCCTGCTTTTGAGGCGGATGATCAGTCTGCTTTGATTTACTTGTTGCTGTCCAAGAAGGAGAAGTGGATGGATAAGGTGTTTCTTGAGAATTCGTACTATTTGCACGGTTACTGGGCAGGGTTGGTTGATCGGTATGAGGAGATGATTGATAAGTATCATCCGGGGTTAGGGGATGAGAGGTGGCCGTTTGTGACGCATTTTGTGGGTTGTAAGCCGTGTGGAAGCTATGGAGATTATCCTGTTGAGAGGTGTCTTAGCAGCATGGAGAGGGCTTTCAATTTTGCTGACAATCAGGTGCTCAAACTCTATGGATTCAGGCATCGTGGTCTGTTAAGCCCTAAGATCAAGAGAATCAGAAATGAGACGGTTACTCCTTTGGAGTTTGTAGACCAGTTTGATATTCGAAGACATTCTACGGAAAGCAGTGAATCCAAAAGCTAG 1326 0.4766 MGQENHKRSNLPTSNARNRGNAIPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLGSSDADAVNQNLIEETNRILAEIRSDADPSDPDDQTPFNPNVTFTLGPKISNWDSERKSWLLQNPEYPNYIRGKARILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNLAHLDIELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPLSKYDDYNLVLHGYPDLLFEQKSWIAVNTGSFLFRNCQWSLDLLDDWAPMGPKGPVREEAGKILTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSYYLHGYWAGLVDRYEEMIDKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEFVDQFDIRRHSTESSESKS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2984 441 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 11 435 - -
Apr9g2984 441 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 11 435 IPR008630 GO:0016021|GO:0016757
Apr9g2984 441 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 132 277 IPR029044 -
Apr9g2984 441 Pfam galactosyl transferase GMA12/MNN10 family 132 370 IPR008630 GO:0016021|GO:0016757
Apr9g2984 441 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2984 Apr-Chr9 36737894 36739904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2984 1 441 Glycosyltransferase AT5G07720 76.149 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2984 K08238 - gmx:100793238 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2984 9 36737894 36739904 Apr9g2984 9 36737894 36739904 ECH