Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2978 ATGAGCTCCTCGCCACATCGTTCTCACGGCAACGGCGATAACAGACCCAGATTTTTCGACTCAAAGACGAAAAGCATCTGTTGGGCGAAGGCTGATACTGTCGCCGGCCGTCATCCAGAGCGGTGGCGCAAAGACGCCGCCGGCAACATTGTCTGCAAACGTTTCTTCAACTGCCTCGGCTGCCTCTGCTACGAGTACGATCACATCATACCCTTCTCCAAAGGTGGTGAATCCACAGCAGATAATTGTCAAATACTTCAATCCAGAGTTAACAGATTCAAATCAGACAAATATGACATTGATTCGGATCAACTCAAAGGCTACTCTTGTGAAGTTAATTTTACTGATAAGGAGCTTGATATAATTGAGATGGCTGTTTACGGTGATGTGATCCGGCCAGGAAACCAGTGTCGTTGCAGAACTGTTGCTGAAAAGCTTGGCAAATTCAAGTCAAAAGATGACGCAGAGGCATGTAAGTTGCCATAG 486 0.4671 MSSSPHRSHGNGDNRPRFFDSKTKSICWAKADTVAGRHPERWRKDAAGNIVCKRFFNCLGCLCYEYDHIIPFSKGGESTADNCQILQSRVNRFKSDKYDIDSDQLKGYSCEVNFTDKELDIIEMAVYGDVIRPGNQCRCRTVAEKLGKFKSKDDAEACKLP* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2978 161 Pfam HNH endonuclease 63 87 IPR002711 GO:0003676|GO:0004519
Apr9g2978 161 CDD HNHc 53 92 IPR003615 -
Apr9g2978 161 PANTHER HNH ENDONUCLEASE 11 161 - -
Apr9g2978 161 SMART HNH_5 46 92 IPR003615 -
Apr9g2978 161 Gene3D - 23 115 - -
Apr9g2978 161 PANTHER F6A14.21 PROTEIN 11 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2978 Apr-Chr9 36666097 36667926 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2978 - - gmx:100775923 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2978 9 36666097 36667926 Apr9g2978 9 36666097 36667926 ECH