Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2973 ATGGCAGAAGAAAGTACAATTAACCAGTTGAAGTTTGAGAAAATTGAGCCTGAAGATGTTGATGAGAAAGCAAATCCTAAAGAGAGGTTAACCATCACAAAAGTTCCACCTAAGATTCTTTCACGTTATCTAAGTGGTCCAAAAGGTTCCTGCCATGACATGTGCAAATATGGCATTCAACATGAAGTTGAAGCTAAACCATGGAGTCCAGCGAAGAAAAGGGTTACCAAAAGGGAAAGTAGAATCAAAGTTCCTGAAGAAAATGTAACTTCTTTGGCAGGGACAAAGAAATCAGGAAGCAGTTCAAAGTCTTCTCAAGCTTCAAAATTTGAAAAGACCAACAGTCCTGTTTACATCAAGGAAGTAACGTATGAAAAAACAATCCCTTCTGGGAAAATCTCACCCCCTTTTGAAGAAACAGATATTCGCTTGGAACATAACAACAGTGACCTAAAGCAAGCACATTCTGAGTCATCTCTCCCAGTGCAGGAATGTTCTAAAAGTCAAACAAAAAGGGAAATAGTGAACAACCAAAGTCCTTCTGGATCAAGCAGCAGAAAGAAAACTGAAAGCAGAAGCAAACAGACAAGGACATCTTCAGCTGTATCCAAGGAAAAATCAACCCCTCTAAGTCCTCCCTTGTCTTCAAAACACAATGTCAAGAAACCTTCAAGCTTAAGTTCCAAGAGTGCCAAGAACTTGACAAAGGTAGATACCTCTTCTTTGAAACATCATGAGAATGTTCAAGAAGTCAAACCTGAACTAGCCACCAGTGACAATTTACCAGACAAAATTTTGCACATCATTGAACCTACTGCAAATTCATCTGAGGAACCAACTCAGGCTTGTGATGAAACTGAATTGTCTCCACCCTCACCTCCATCATCAGAGGACAAAAGATTGAAGCAGACCAGCAAGAAAACTAGCAAGTCTGGAGTGTCTGCATCTTCAAGGAAGGACCTCAGATCTGTGGCAGGGAACAAAGGCAAGACAAATATACTTCACAGAACACGTGCTTCGCGATCACCATCAGTGTCATCATTTGCTTCCTCATCAAACTCTTCCCTTGTAAAACAAAACGGTGCTATTTCTAAGTCCAACAAAACTTACAAAACAGTACATGGTCATCAAGGCGAAAATGTGAAGGTGGTATACAAAATCAGGCCAAAAATGAGCACCATAGTTGGGGCTGCAAATAAGGTTGTTACGGCCAGGAAGTTAACTTTTAGAAGAGGAAAGGTGATTGAACTTAAGCCTCAAAGCAACAACATCCCAAGGAGACTCAAATTCAAGCCAGCACGCACTCTTGGTGATGACAAAAGGAGAGATATAAATAGTAGTAGAAAAGGGACTGGTACAGATAATAAAGTTGATGATAGTGGTGATGTAAATGCTGCAAATATCAAGCCTGAGAAAGTTGTGGGCAGACTCCAAGTTGTGGAAGGAAGTAAAAGGAGAATTGTTGGTAGAAAAGTTGGTGGAGAAAGAAGCAAGATAGAGGGTTCGAAATCAGGATCTGAGAAAGTGGTTTTGAGGCATCAAAATGTGGAGGGGAAGAAACATAACCCACGTTTGTACAATAATGTGATTGAAGAGACTGCAAGCATGCTTGCTGAGTTAAGGAAGAGCAAGGTTAAGGCTCTAGTTGGTGCATTTGAAACTGTGATATCTCTTGATTCTCCTAGAGAAGCCACACCCGCAGAAGTGAGCACAGCTTGCTGA 1722 0.4088 MAEESTINQLKFEKIEPEDVDEKANPKERLTITKVPPKILSRYLSGPKGSCHDMCKYGIQHEVEAKPWSPAKKRVTKRESRIKVPEENVTSLAGTKKSGSSSKSSQASKFEKTNSPVYIKEVTYEKTIPSGKISPPFEETDIRLEHNNSDLKQAHSESSLPVQECSKSQTKREIVNNQSPSGSSSRKKTESRSKQTRTSSAVSKEKSTPLSPPLSSKHNVKKPSSLSSKSAKNLTKVDTSSLKHHENVQEVKPELATSDNLPDKILHIIEPTANSSEEPTQACDETELSPPSPPSSEDKRLKQTSKKTSKSGVSASSRKDLRSVAGNKGKTNILHRTRASRSPSVSSFASSSNSSLVKQNGAISKSNKTYKTVHGHQGENVKVVYKIRPKMSTIVGAANKVVTARKLTFRRGKVIELKPQSNNIPRRLKFKPARTLGDDKRRDINSSRKGTGTDNKVDDSGDVNAANIKPEKVVGRLQVVEGSKRRIVGRKVGGERSKIEGSKSGSEKVVLRHQNVEGKKHNPRLYNNVIEETASMLAELRKSKVKALVGAFETVISLDSPREATPAEVSTAC* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2973 573 MobiDBLite consensus disorder prediction 195 237 - -
Apr9g2973 573 MobiDBLite consensus disorder prediction 9 28 - -
Apr9g2973 573 SMART CaM_binding_2 403 557 IPR012417 GO:0005516
Apr9g2973 573 MobiDBLite consensus disorder prediction 238 252 - -
Apr9g2973 573 MobiDBLite consensus disorder prediction 307 321 - -
Apr9g2973 573 Pfam Plant calmodulin-binding domain 490 557 IPR012417 GO:0005516
Apr9g2973 573 Pfam Plant calmodulin-binding domain 406 485 IPR012417 GO:0005516
Apr9g2973 573 MobiDBLite consensus disorder prediction 273 298 - -
Apr9g2973 573 MobiDBLite consensus disorder prediction 1 28 - -
Apr9g2973 573 MobiDBLite consensus disorder prediction 429 463 - -
Apr9g2973 573 MobiDBLite consensus disorder prediction 431 456 - -
Apr9g2973 573 MobiDBLite consensus disorder prediction 336 360 - -
Apr9g2973 573 MobiDBLite consensus disorder prediction 66 360 - -
Apr9g2973 573 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 1 573 - -
Apr9g2973 573 MobiDBLite consensus disorder prediction 153 186 - -
Apr9g2973 573 MobiDBLite consensus disorder prediction 91 113 - -
Apr9g2973 573 PANTHER EMB|CAB62594.1 1 573 - -
Apr9g2973 573 MobiDBLite consensus disorder prediction 138 152 - -
Apr9g2973 573 MobiDBLite consensus disorder prediction 66 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2973 Apr-Chr9 36606956 36610412 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2973 - - gmx:102660235 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2973 9 36606956 36610412 Apr9g2973 9 36606956 36610412 ECH