Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr9g2970 | ATGTTGGGTTCAAAGAAATCTCCTTTGAAGGTTGCAAAAACTAGATCTGTTGATCCAGTCTATCCTGTTAAATCTGGGATGAACCCATTTGATTCTGATGATGAGGCAACGGATAACAAGTATAACTCCTCTAGGAAGACGTCTTCAGAACGCGCACTTGTTACACTGGAAGTTAACACCAACCCTTTTGATGATGACATTGATGCTAAAAAGATATCTTCATCAACTTCGTATGCCTTTCAATCAGCCGACAGGAACAGGTATAAGAATGATTTTCGTGATTCTGGTGGATTAGAGAATCAATCAGTGCAAGAATTGGAGAATTATGCTGTCTACAAGGCTGAAGAGACTACAAAATCAGTCAACAATTGTTTGAAGATAGCAGAGAACATAAGAGAGGATGCTACCAAGACTTTAGTCACCCTTCATCAACAGGGTGAGCAAATTACCAGGAGTCACCATGTTGCTGCTGACATTGATCATGATTTGAGTCGGGGAGAAAAGCTCTTGGGAAGCCTTGGTGGTCTCTTCTCTAAAACTTGGAAACCAAAGAAGACACGTGCAATAACAGGCCCTGTTATTGTTGGAGATGACCCGGTCAGGAGAAACGGCAACCACTTGGAGCAGAGAGAGAAGTTGGGATTGACTTCTGCACCACCCAAAGGGCAGTCCAAGCTGCGGAACCCACCTCAGGAACCAACAAATGCACTTGAAAAAGTTGAGGTGGAAAAAGTGAAGCAAGATGATGCACTGTCAGATTTAAGTGATCTGTTGGGAGAGCTTAAAGAGATGGCTGTTGACATGGGATCCGAAATTGAGAGGCACAACAAAGCCCTCAATCATCTTTACGATGATGTGGATGAGTTGAATTTCCGAATGAAAGGTGCTAATCAACGTGGCCGTCGTTTGCTTGGAAAATAG | 921 | 0.4311 | MLGSKKSPLKVAKTRSVDPVYPVKSGMNPFDSDDEATDNKYNSSRKTSSERALVTLEVNTNPFDDDIDAKKISSSTSYAFQSADRNRYKNDFRDSGGLENQSVQELENYAVYKAEETTKSVNNCLKIAENIREDATKTLVTLHQQGEQITRSHHVAADIDHDLSRGEKLLGSLGGLFSKTWKPKKTRAITGPVIVGDDPVRRNGNHLEQREKLGLTSAPPKGQSKLRNPPQEPTNALEKVEVEKVKQDDALSDLSDLLGELKEMAVDMGSEIERHNKALNHLYDDVDELNFRMKGANQRGRRLLGK* | 307 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr9g2970 | 306 | MobiDBLite | consensus disorder prediction | 210 | 234 | - | - | |
| Apr9g2970 | 306 | SUPERFAMILY | SNARE fusion complex | 101 | 171 | - | - | |
| Apr9g2970 | 306 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 246 | 303 | IPR000727 | - | |
| Apr9g2970 | 306 | CDD | SNARE_SNAP25N_23N_29N_SEC9N | 108 | 172 | IPR044766 | GO:0005484|GO:0031201 | |
| Apr9g2970 | 306 | SMART | tSNARE_6 | 236 | 303 | IPR000727 | - | |
| Apr9g2970 | 306 | SMART | tSNARE_6 | 106 | 173 | IPR000727 | - | |
| Apr9g2970 | 306 | Gene3D | - | 238 | 305 | - | - | |
| Apr9g2970 | 306 | Gene3D | - | 97 | 174 | - | - | |
| Apr9g2970 | 306 | PANTHER | TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 306 | - | - | |
| Apr9g2970 | 306 | MobiDBLite | consensus disorder prediction | 31 | 45 | - | - | |
| Apr9g2970 | 306 | CDD | SNARE_Qc | 246 | 302 | - | - | |
| Apr9g2970 | 306 | SUPERFAMILY | SNARE fusion complex | 244 | 304 | - | - | |
| Apr9g2970 | 306 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
| Apr9g2970 | 306 | PANTHER | SYNAPTOSOMAL ASSOCIATED PROTEIN | 1 | 306 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Apr9g2970 | Apr-Chr9 | 36572825 | 36575864 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr9g2970 | K18211 | - | gmx:100809874 | 497.278 |
Event-related genes