Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2956 ATGGAGCGCGAGAGTGGGAACAGTGATCAACGCCGTGTGGGTTTACTCTACGACGAGAAGATGTGTAAGCACCACACACCAGACGACGATTACCATCCCGAGAGCCCTAATCGCATTACTGCTATTTGGAACAAACTTCAAACCGCTGGCATTCCTCAACGATGCGTTATATTGGATGCTAAAGAAGCTGAAGACAAACATATACTCTTAGTGCACTCCAAGAATCATGTAAAACTGATTAAGAACATTAGCTCGAAACAATTTGATTCGCGAAGGCATAAGATGGCCGCAAAGTTGAATTCTATATACTTTAATGAAGGTTCAACGGAAGCTGCTTACCTTGCTGCTGGCTCTGCTGTAGAGGTTGTGAAAAGAGTGGCAAGTGGGGAATTGAATTCTGCTGTTGCTATTGTTAGACCTCCTGGTCATCATGCAGAACAAAATGAAGCTATGGGATTTTGTCTGTTCAACAATGTGGCAATTGCAGCACGTTATCTCTTAGATGAAAAACCAGAATTAGGTGTAAAGAAAATTTTAATTGTTGATTGGGACGTCCATCATGGAAATGGTACTCAAAAAATGTTCTGGAATGATTCTCGAGTTTTATTCTTCTCTGTTCACAGGCATGAGTTTGGGAATTTTTATCCGAGCAATGATGATGGCTTTTATACCATGATTGGAGAAGGAGCAGGTGCTGGATATAATATAAATGTGCCCTGGGAGAATGGGAGATGTGGTGATGCAGATTACTTTGCTGTGTGGGACCACATCTTGCTCCCTGTTGCGAAAGAATTTAATCCAGACATAATTATAGTTTCTGCCGGATTTGATGCAGCTGTTGGTGACCCTCTGGGAGGATGTCGTGTCACACCATTTGGTTATTCTGTTCTGTTGAAAAAGCTGATGAATTTGGCTGAAGGTAAGATTGTACTGATTTTAGAAGGAGGATATAATCTCGATTCCATTGCAAAATCCATGCGTGCTTGTTTGGAAGTTTTGCTAGAAGACAAGCCTGTTATTGGATCGTCAGAGGCCTATCCGTTTGAGTCTACATGGCGTGTGATTCAAGCGGTTCGACAGGAGTTAAGTCCCTTTTGGCCTACACTTGCGTGTGAATTACCACAAAAGTTAATTTCTCAAATGGCACCACCTCCGCATACTCTTATCTTGAGCTCTGACTCTGAGGCTGAGGATGATAAGGGTGCAATAAATTCAGAAAATCTTGGAGAACTTCTTGAGGATGTCATTAAACCACTTACCAATCTGAAAATTGATGCTGATGAAGAAATTGATGCTTCTAGTTCTTGGCGATCGGAATTGTCAAATGTTCACATATGGTATGCCTCTTATGGATCAAATATGCTGAAAGCAAGATTATATTGCTACATAGCAGGTGGACAGGTGGAAGGTATGCAGAAGAACTGTTCTGGTTCGAAGAACAGAACTCTGCCAGCGGAAATCCTGTGGAAGACTTTCCCTTGTCATATATTCTTCGGTCGTGATTCATCTCATTCATGGGGTCTTGGAGGAGTTGCATTTCTTAATCCTGAGAAAAATTTTCAGCACAACACTTTCATGTGCCTGTACAAAATTTCGCTAGAGCAGTTCAATGATATTTTGTTTCAGGAAAATGGTTTAAGCCTTAATGTGGGCTCTCCTTTATTTGATGTAACTACCCTGAATGCTGTCTCTGACAACGAGTTCAATTCTCTGGAGGTTGTCAAGGGTGGTTGGTATGGTAATGTTGTCTACTTGGGAAAGGAGCAGGATATTCCAATTATTACCATGACGTGTTCGCTTATTGATATTGAACACTTCAAATCTGGTAAATTACCGTTACATGCCCCTAATGAAGCGTATGCCAACACCTTAATAAAAGGGTTGGTAGAGGGAGAACAGCTTTCAGAGGTGGAAGCCGTTGCTTACATAGAAGGTGCTGCTAAATCGCTGTGA 1953 0.4168 MERESGNSDQRRVGLLYDEKMCKHHTPDDDYHPESPNRITAIWNKLQTAGIPQRCVILDAKEAEDKHILLVHSKNHVKLIKNISSKQFDSRRHKMAAKLNSIYFNEGSTEAAYLAAGSAVEVVKRVASGELNSAVAIVRPPGHHAEQNEAMGFCLFNNVAIAARYLLDEKPELGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHEFGNFYPSNDDGFYTMIGEGAGAGYNINVPWENGRCGDADYFAVWDHILLPVAKEFNPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLMNLAEGKIVLILEGGYNLDSIAKSMRACLEVLLEDKPVIGSSEAYPFESTWRVIQAVRQELSPFWPTLACELPQKLISQMAPPPHTLILSSDSEAEDDKGAINSENLGELLEDVIKPLTNLKIDADEEIDASSSWRSELSNVHIWYASYGSNMLKARLYCYIAGGQVEGMQKNCSGSKNRTLPAEILWKTFPCHIFFGRDSSHSWGLGGVAFLNPEKNFQHNTFMCLYKISLEQFNDILFQENGLSLNVGSPLFDVTTLNAVSDNEFNSLEVVKGGWYGNVVYLGKEQDIPIITMTCSLIDIEHFKSGKLPLHAPNEAYANTLIKGLVEGEQLSEVEAVAYIEGAAKSL* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2956 650 Gene3D Histone deacetylase domain 6 382 IPR037138 -
Apr9g2956 650 Pfam Histone deacetylase domain 32 332 IPR023801 -
Apr9g2956 650 PANTHER HISTONE DEACETYLASE 4 605 - -
Apr9g2956 650 PRINTS Histone deacetylase superfamily signature 140 163 IPR000286 -
Apr9g2956 650 PRINTS Histone deacetylase superfamily signature 267 277 IPR000286 -
Apr9g2956 650 PANTHER BNAA09G05590D PROTEIN 4 605 - -
Apr9g2956 650 SUPERFAMILY Arginase/deacetylase 11 366 IPR023696 -
Apr9g2956 650 Gene3D - 433 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2956 Apr-Chr9 36427152 36433540 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2956 K11406 - gmx:100788831 1194.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2956 9 36427152 36433540 Apr9g2956 9 36427152 36433540 ECH