Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2948 ATGGCTTCCACGCCCAGTTTTGCACCTGTTGTGTTTCTATTGCTCATTTTTGGGTGCACTGCAAGGCCTTTGTATCCATCTTCTAGCAAAGGTGGTGATGGAAACAGGCAGCCTCTACAAACTTTTCGTCCATATAACATTGCACACCGCGGTTCAAATGGCGAGCTTCCTGAAGAAACTCGTCCTGCATACATGAGAGCTATTGAAGAAGGTGCAGACTTCATTGAAACTGACATCTTATCATCCAAAGATGGTGTTCTTATATGTTTCCATGATGTTACCCTTGATGCTACTACTGATGTTGCAAGCCACAAAGAGTTTGCCAATCGTAAAAGAACATATGAAGTCGAGGGGGCCAATGTTACTGGCTTTTTTACTGTTGATTTCACATTTAAAGAATTGGAGTCGTTGAGAGTGAAACAGAGGTGTAGCTTCAGGGATCAACAGTTCAATGGAAAATTTCAAATAATCACTTTTGAAGAGTACATTTCCATAGCACTGGATGCACCCAGAGTTGTTGGAATATATCCAGAGATAAAAGATCCAGTATTTATCAATGAGCATGTGAAATGGGAAAATGGCAAAAGATTTGAGGACAAGTTTGTGGAGACACTTCAGAAATATGGATACATGGGTTCCTACCTGTCAAAAGATTGGTTGAAACAGCCTGCATTTATTCAGTCATTTGCTCCGACTTCACTTGTGTATATATCAGATAAAACAGACTTGCCCAAGATTTTCTTGATTGATGATATTACTGTTCGAACACAAGACACTAATCAGTCATATTGGGAAATTACATCTGATAAATACCTAAACTACATAAAGCAATACGTTGTGGGAATTGGACCTTGGAAGGACACGTTGGTACCTGTGGTAAATAATTATGAGACAACACCTACTAATCTTGTTGCTAGAGCACATGCTCATAACCTCCAGGTGCATCCGTATACTTACCGAAATGAGAACCTATTTTTGCACTTCAACTTTAGTCAAGATCCATATTTGGAGTATGATTACTGGATCAACAAAATAGGAGTTGATGGTCTGTTTACAGACTTCACAGGAAGTCTTCATAGATTTCAGGAATGGACATCCTCTAAACATCATGACATTGACGACAAGAGTGCATCCAAGCTATTGCATAAAATTGCTTTATTGGTCTCCTCTTATGAATGA 1179 0.3919 MASTPSFAPVVFLLLIFGCTARPLYPSSSKGGDGNRQPLQTFRPYNIAHRGSNGELPEETRPAYMRAIEEGADFIETDILSSKDGVLICFHDVTLDATTDVASHKEFANRKRTYEVEGANVTGFFTVDFTFKELESLRVKQRCSFRDQQFNGKFQIITFEEYISIALDAPRVVGIYPEIKDPVFINEHVKWENGKRFEDKFVETLQKYGYMGSYLSKDWLKQPAFIQSFAPTSLVYISDKTDLPKIFLIDDITVRTQDTNQSYWEITSDKYLNYIKQYVVGIGPWKDTLVPVVNNYETTPTNLVARAHAHNLQVHPYTYRNENLFLHFNFSQDPYLEYDYWINKIGVDGLFTDFTGSLHRFQEWTSSKHHDIDDKSASKLLHKIALLVSSYE* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2948 392 PANTHER OS01G0763600 PROTEIN 7 391 - -
Apr9g2948 392 CDD GDPD_ScGlpQ1_like 44 355 - -
Apr9g2948 392 Pfam Glycerophosphoryl diester phosphodiesterase family 49 356 IPR030395 GO:0006629|GO:0008081
Apr9g2948 392 Gene3D Phosphatidylinositol (PI) phosphodiesterase 42 361 IPR017946 GO:0006629|GO:0008081
Apr9g2948 392 SUPERFAMILY PLC-like phosphodiesterases 44 360 IPR017946 GO:0006629|GO:0008081
Apr9g2948 392 ProSiteProfiles GP-PDE domain profile. 44 362 IPR030395 GO:0006629|GO:0008081
Apr9g2948 392 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 7 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2948 Apr-Chr9 36377291 36381968 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2948 16 366 Acyl Lipid Metabolism Gene Families AT5G08030 76.923 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2948 K01126 - gmx:100778145 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2948 9 36377291 36381968 Apr9g2948 9 36377291 36381968 ECH