Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2942 ATGAGGTGGGAAAGGGTTGAGTTGAACCCTTACATAGGCACAGAGGGAGAAAGGGTATCTATGTCTGGGCCAGGGAAGAGGTGGGGACACACCTGCAACGCCATCCAAGGTGGCAGATTTCTCTATGTCTTCGGAGGTTACGGCAAAGATAACTGTCAGACCAACCAAGTTCACGTTTTTGACTCTCTGAAGCAGATTTGGAGCCAACCCGCCATGAAGGGCCTTCCACCTGCTCCTAGGGACAGCCATACTTGTACAGCCATTGGTGATAATCTTTTTGTGTTTGGGGGTACAGATGGGATGAATCCGCTGAGGGACTTGCACATATTAGACACTATTTCAAATACGTGGATTTCTCCAACTATAAGAGGAGAATGGCCAGAGGCACGTGAGGGTCACAGCGCGGCAGCTGTTGGCAAACGGATGTTCATATTTGGTGGTTGTGGAAAATCTGTTGATAATAATAATGAGGTCTACTACAATGATCTTTACATATTAAATACAGAGACATTTGTTTGGAAGTGTGCCACAACATCAGGCAATCCACCATCCCCTCGTGATAGCCACACTTGCTCATCTTGGAAAAACAAAATTATTGTGATAGGCGGTGAAGATGGGCATGATTATTACTTGTCTGACGTTCATATCCTAGATACTGATACCTTAATTTGGAGGGAGCTGAAGACATCAGGCCAATTGTTGCCACCTCGAGCTGGTCATTCCACTGTTTCTTTTGGCAAGAACTTGTTTGTTTTTGGTGGATTTACAGATGCCCAAAATCTCTACAATGACCTTTATATGCTTGATATTGATACTGGTATTTGGACAAATGTTACAATTGCAGCCAACGGTCCTTCTGCCAGATTTTCTGTAGCTGGTGATTGTTTAGACCCAATTAAGGGTGGTGTTCTTGTGTTTATTGGTGGTTGTAATAAAAGTCTTGAGGCCCTGGATGACATGTATTACCTACATACAGGGCTTGCTCGGGAAAGTGAACAGAGACCAGAGAAATTATCTTTAAGGAAGCAATTGAAACTGAAATGCCAAGAACAAAATCTCAATCCTAGCCAAAGTCCAGTTCTGGTTAGATATGGAGTGGGTTCTGATACCGGTCAGATGATGACAATGTTGAATTATAGCCAGCCAAGTAGACTAAATATCCCTCTAAATCAACTGCCTCCTTCTGGAAACAAAATGTTTGAAGCCAAGGTTATTGAAAACGTATCAGAAGGATATACTATTGAAACTGTTATTGATGGAAAGCCTCTTCGTGGATTTCTGTTTTTAAACAAGCCAAACTCTCTGTACTCTGCTGCTTATACTCCCAGTAGCAGGAAAAGGACTGGTGGTGAACATGATAGTGCTAATTCTGACAAATTCAAAACTCCTAAATTGGTCAAGCAAAATCAAATGGAAAATAGAGAAGCAGTTCGTGGAGACTATTCAGAATCTCATGAACAACGCACTGACTCTGTTGCTGCACTTATGTCAAGTACCCCAACAACTGCCAATACTTCTGATACCCATAAGATTTCTGCCAACCCAGAACCAGAATCTGCTGCTTTGAATCAAAATGATGAAAAAGATGAAACACCAAAATCCTTAGAGCGAAACTTGAAAAATGACGGAGCAAATGATGTGACAAGTCCCAAAGGTGAAGTCCAAACAAATGATCAAACAAATGTGCTAACTTCCAACTTCGAAGTTCCAAGACATGATAAACAAAGTGATGCACCAGACTGCAACACTGAATTTCTAAAATCTGCTGCAGCTGAGAGTGCTACATGTCTGCCAAATCAAGGTGCAATGGCAGATTCCAACTTCCAAGGACAGGAGAATGCAGTGAACCAGCAAAATTAA 1860 0.421 MRWERVELNPYIGTEGERVSMSGPGKRWGHTCNAIQGGRFLYVFGGYGKDNCQTNQVHVFDSLKQIWSQPAMKGLPPAPRDSHTCTAIGDNLFVFGGTDGMNPLRDLHILDTISNTWISPTIRGEWPEAREGHSAAAVGKRMFIFGGCGKSVDNNNEVYYNDLYILNTETFVWKCATTSGNPPSPRDSHTCSSWKNKIIVIGGEDGHDYYLSDVHILDTDTLIWRELKTSGQLLPPRAGHSTVSFGKNLFVFGGFTDAQNLYNDLYMLDIDTGIWTNVTIAANGPSARFSVAGDCLDPIKGGVLVFIGGCNKSLEALDDMYYLHTGLARESEQRPEKLSLRKQLKLKCQEQNLNPSQSPVLVRYGVGSDTGQMMTMLNYSQPSRLNIPLNQLPPSGNKMFEAKVIENVSEGYTIETVIDGKPLRGFLFLNKPNSLYSAAYTPSSRKRTGGEHDSANSDKFKTPKLVKQNQMENREAVRGDYSESHEQRTDSVAALMSSTPTTANTSDTHKISANPEPESAALNQNDEKDETPKSLERNLKNDGANDVTSPKGEVQTNDQTNVLTSNFEVPRHDKQSDAPDCNTEFLKSAAAESATCLPNQGAMADSNFQGQENAVNQQN* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2942 619 MobiDBLite consensus disorder prediction 600 619 - -
Apr9g2942 619 SUPERFAMILY Kelch motif 76 326 IPR015915 GO:0005515
Apr9g2942 619 Pfam Galactose oxidase, central domain 236 285 - -
Apr9g2942 619 Pfam Galactose oxidase, central domain 185 230 - -
Apr9g2942 619 Pfam Galactose oxidase, central domain 27 61 - -
Apr9g2942 619 Pfam Galactose oxidase, central domain 79 117 - -
Apr9g2942 619 PANTHER KELCH REPEAT DOMAIN 1 556 - -
Apr9g2942 619 MobiDBLite consensus disorder prediction 446 460 - -
Apr9g2942 619 Gene3D - 154 386 IPR015915 GO:0005515
Apr9g2942 619 PANTHER GALACTOSE OXIDASE/KELCH REPEAT SUPERFAMILY PROTEIN 1 556 - -
Apr9g2942 619 Gene3D - 1 153 IPR015915 GO:0005515
Apr9g2942 619 MobiDBLite consensus disorder prediction 488 521 - -
Apr9g2942 619 MobiDBLite consensus disorder prediction 439 558 - -
Apr9g2942 619 MobiDBLite consensus disorder prediction 541 558 - -
Apr9g2942 619 Pfam Kelch motif 126 171 - -
Apr9g2942 619 SMART kelc_smart 91 140 IPR006652 GO:0005515
Apr9g2942 619 SMART kelc_smart 248 294 IPR006652 GO:0005515
Apr9g2942 619 SMART kelc_smart 197 247 IPR006652 GO:0005515
Apr9g2942 619 MobiDBLite consensus disorder prediction 471 487 - -
Apr9g2942 619 MobiDBLite consensus disorder prediction 522 540 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2942 112 323 Acyl Lipid Metabolism Gene Families AT3G05420 31.532 1.56e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2942 - - gmx:100803752 1021.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2942 9 36313939 36320750 Apr9g2942 9 36313939 36320750 ECH