Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2933 ATGCGGCGACGGGCTGCCGAGTATCGGCGCCCGGTTCGACGGAGGTTTTCATATTGGATCTGGCTTCTCCTCGCCTTCTCCTCTATCCTCGGATTGATTCTCTTCGTTGTTCAACACAATCACCACCACCAAGATCCGCTTCATGACTTTCCTTTTCAGGAGAGAAGTGCAAGAGTTGAACATTTTGCTAAGGAGAGATTGAATTTTACTGAAGAGATTTTAAGTGTAGCATCATTTTCTCGGCAGTTAGCACAACAAATGACTCTAGCCAAGGCTTATGTGGTTATTGCTAAAGAACACAATAATCTTCACCTTGCCTGGCAGCTTAGCTCAAAGATCAGAAGTTGCCAGCTTTTGCTTTCAAAAGCTGCCATGACTGGTGAGCCAGTCACACTGGAGGAGGCAGAGCCAATTATTAAAAGCCTTTCATTTCTAATTTTCAAGGCACAAGATATCCATTATGACATTGCAACCACAATAGTGACTATGAAATCACATATTCAAGCTCTTGAAGAGCGTGCCAATGCAGCAACAGTTCAAAGCACTGTGTTTGGTCAAATAGCAGCCGAAGCAGTACCTAAGAGTCTTCATTGCCTAAATGTGAAACTCATGTCTGATTGGCTAAAGATGCCATCCCTGCAAGAACTCTCAGATGAGATGAAAAACTCCCCGCGGCTCATGGACAACAACCTATATCATTTCTGCATATTTTCAGATAATGTATTGGCAACATCTGTGGTTGTAAACTCAACTGTCTCCAATGCTGACCATCCGAAGCAGTTGGTCTTTCACATTGTCACTAATGGAGTCAATTATGGGGCAATGCAAGCATGGTTACTTAGTAATGACTTTAATGGAGCAACCATAGAGGTACAGAATATTGAGGAGTTTCATTGGTTGAATGCATCTTATTCTCCAATTGTTAAGCAGCTCCTCAATCCTGATTCACGGACCTTCTATTTTGGAGCATATCAAGATTTAAATGTTGAGCCCAAAATGCGGAACCCCAAGTATTTGTCTTTATTGAATCATCTTCGGTTTTACATCCCTGAGATTTATCCACAACTTGAGAAGGTTGTCTTCCTGGATGATGATCTTGTTGTCCAGAAAGATCTGACCCCTCTTTTCTCTCTGGATTTGCATGGGAATGTGAATGGTGCTGTTGAAACATGTCTTGAAGCATTTCATCGGTACTACAAGTATCTCAACTTCTCAAACTCAATTATTAGCTCAAGGTTTGATCCACAGGCATGTGCATGGGCATTTGGTATGAACATTTTTGACTTGGTTGCCTGGAGGAAGGCAAATGTTACTGCAAGATATCATTACTGGCAAGAGCAGAATGCTGATGGGACACTCTGGAAGATGGGGACACTTCCACCTGCTCTTTTATGTTTTTATGGTTTGACAGAGCCACTTGACAGAAGATGGCACGTTTTAGGATTGGGTTATGACCTAAATATTGACAACCGCCTCATTGAAAGTGCGGCAGTTATTCACTACAATGGAAACATGAAGCCGTGGTTGAAGTTAGCTATAAGCAGGTATAAGCCTTTATGGGACAAGTACATAAATCAAAGTCACCCTCATCTCCAAGATTGTGTCACAAGTTGA 1614 0.4213 MRRRAAEYRRPVRRRFSYWIWLLLAFSSILGLILFVVQHNHHHQDPLHDFPFQERSARVEHFAKERLNFTEEILSVASFSRQLAQQMTLAKAYVVIAKEHNNLHLAWQLSSKIRSCQLLLSKAAMTGEPVTLEEAEPIIKSLSFLIFKAQDIHYDIATTIVTMKSHIQALEERANAATVQSTVFGQIAAEAVPKSLHCLNVKLMSDWLKMPSLQELSDEMKNSPRLMDNNLYHFCIFSDNVLATSVVVNSTVSNADHPKQLVFHIVTNGVNYGAMQAWLLSNDFNGATIEVQNIEEFHWLNASYSPIVKQLLNPDSRTFYFGAYQDLNVEPKMRNPKYLSLLNHLRFYIPEIYPQLEKVVFLDDDLVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSRFDPQACAWAFGMNIFDLVAWRKANVTARYHYWQEQNADGTLWKMGTLPPALLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHYNGNMKPWLKLAISRYKPLWDKYINQSHPHLQDCVTS* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2933 537 Pfam Glycosyl transferase family 8 236 511 IPR002495 GO:0016757
Apr9g2933 537 SUPERFAMILY Nucleotide-diphospho-sugar transferases 232 535 IPR029044 -
Apr9g2933 537 CDD GT8_like_1 232 525 - -
Apr9g2933 537 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 234 534 IPR029044 -
Apr9g2933 537 PANTHER HEXOSYLTRANSFERASE 3 537 - -
Apr9g2933 537 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 537 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2933 Apr-Chr9 36184503 36188663 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2933 1 534 Glycosyltransferase AT2G20810 54.917 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2933 K13648 - gmx:100805886 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2933 9 36184503 36188663 Apr9g2933 9 36184503 36188663 ECH