Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2928 ATGGAGCTATGGAGCAAAGCTCGAAGCTTTGCAGAAGAAGCAGCGAAACGGTCTCAAGAACTGTCGTTGGGTGCTTCCAAGTTGAGCGACATCATAGCAGAAACCACGAAGGAGATCGCGTCGCAAGCTTCCAAGCACCTGGACTTGGTCGAACCTTCTTCGAAAAGCGACGTCGATCTCGAGCGTTTTGGCTTCACCGATGAGTTGAGGGAGTTCGTCAAAGGGATCACCATCACTACCTTTGAGCATTTTCCCCTTCAAGATGATACGGAATTGTCTGATGTTCCTTCAGTTTCAAATGTTAGGCAGGATCTAACCGAGTGGCAGGAAAAACATGCCAATCTTGTTCTTTCTACAGTCAAGATTTCAAGATTGAGGTATGAGCTGTGTCCTCGTGTCATGAAAGAGAGGAAGTTTTGGAGAATATATTTTATAATTATGAATAGTCATATTGCACCCTATGAGAATCAGTACATGGAAGATGCTATACTAAAATCATCTGAACAAGTAGAAGATGACAAAGTGATGATGGAACCGTTAAAAGTTGAATTGACCTCTATTCAACAAGTGCAGGAAGTGAAAAAAGAGACCAAATCTTCAAATTCATCAACCGAGCAAGACTTGGATGTATTTCTTTTGAGAGATAAAAACAGCGATGATGACCTAGATGATGGCAATGAGGAATATGGTGATGATGATTTGGACCAACTGGTGGATAGTTCGGATGATGAGAAAGGGAAATCATAG 747 0.4203 MELWSKARSFAEEAAKRSQELSLGASKLSDIIAETTKEIASQASKHLDLVEPSSKSDVDLERFGFTDELREFVKGITITTFEHFPLQDDTELSDVPSVSNVRQDLTEWQEKHANLVLSTVKISRLRYELCPRVMKERKFWRIYFIIMNSHIAPYENQYMEDAILKSSEQVEDDKVMMEPLKVELTSIQQVQEVKKETKSSNSSTEQDLDVFLLRDKNSDDDLDDGNEEYGDDDLDQLVDSSDDEKGKS* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2928 248 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 51 - -
Apr9g2928 248 PANTHER BSD DOMAIN-CONTAINING PROTEIN 54 244 - -
Apr9g2928 248 MobiDBLite consensus disorder prediction 192 248 - -
Apr9g2928 248 Gene3D BSD domain 81 163 IPR035925 -
Apr9g2928 248 SUPERFAMILY BSD domain-like 64 155 IPR035925 -
Apr9g2928 248 Pfam BSD domain 107 146 IPR005607 -
Apr9g2928 248 MobiDBLite consensus disorder prediction 221 239 - -
Apr9g2928 248 ProSiteProfiles BSD domain profile. 122 151 IPR005607 -
Apr9g2928 248 MobiDBLite consensus disorder prediction 192 208 - -
Apr9g2928 248 PANTHER BSD DOMAIN PROTEIN 54 244 - -
Apr9g2928 248 PANTHER BSD DOMAIN PROTEIN 1 51 - -
Apr9g2928 248 SMART wurzfinal6 100 151 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2928 Apr-Chr9 36144912 36150244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2928 3 227 EF-hand Containing Proteins AT1G69030 39.384 2.83e-55 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2928 - - gmx:100527562 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2928 9 36144912 36150244 Apr9g2928 9 36144912 36150244 ECH