Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2927 ATGTGCAAGCCGGAGTTACAAGATTTTGGGTATATGGGTTCGAATACGTGGGAGAGTAAGGTTCAGAAGGTGGGCATGGGTGGGTTAGGATCCGGGTCGAGTTCAGGGTCTGGGTCGTCAAGGTCTAGAATGAAGCTATGGATGATACGGGCAACCACATCGGTGTTACTGTGGACTTGCATCGTTCAGTTAACGGCTTTGGGTGACATGTGGGGGCCTAGAGTTTTGAAAGGTTGGCCTTCTTGTTTTTCTCACGAATCTGCGGCCAGAGCAATAGATGTTGAATTACCGTCTCCACGTCCACCTCTTTTACCTCCCAAGAGAGTTTACAAGAACAATGGGTACCTTATGGTCTCTTGCAATGGAGGATTGAACCAAATGAGAGCAGCTATATGTGATATGGTAGCCATTGCTAGATATCTGAATGTCACGCTTATAGTCCCTGAACTGGATAAAACATCCTTTTGGGCTGATCCCAGTGACTTCCAAGACATATTTGATGTGGATCATTTTATTACGTCCTTAAGAGATGAAGTGCGGATATTGAAAGAGTTGCCTCCTAGACTCAAGCTGAAAGTGGAACGTGGGTTTCTCTACACTATGCCTCCCATTAGTTGGTCTGACATATCTTACTATAAGAACCAGATTCTACCCTTAATACAAAAGTACAAAGTTGTCCATTTAAATAGAACTGATGCTCGGCTTGCCAATAATGGTCAACCTATAGAGATTCAGAAGTTGCGGTGCCGAGTTAATTTTAGTGCTTTGAGATTTACTTCTCAGATAGAGGAGTTGGGCAGAAAGGTGATCAGGCTCCTAAGGCAAAACGGTCCATTTCTGGTGCTTCATTTAAGGTATGAGATGGACATGTTGGCATTTTCTGGATGTACTCAAGGTTGTAACAGTGATGAGGTGGAAGAGTTGACAAGAATGAGATATGCTTATCCTTGGTGGAAAGAAAAAATAATTAATTCTGATTTGAAAAGAAAAGATGGTTTATGTCCTCTAACTCCTGAGGAGACCGCCCTTACGCTTAAAGCTCTGGACATTGATCGGAGCATTCAAATCTACATTGCAGCTGGGGAAATATATGGTGGGGAAAGGAGAATGGAAAGTCTAGCAAAGGAATACCCAAAATTGGTCAGGAAGGAAACGCTGTTGGAGCCATCTGACCTTCAGTTCTTCCAAAATCATTCATCTCAGATGGCAGCATTGGATTATCTTGTCTCATTAGAGAGTGATATTTTTGTCCCCACGTATGATGGAAATATGGCCAAAGTTGTTGAGGGCCATCGCAGATATCTTGGGTTCAAGAAGACAATTTTATTGAACAGAAGGCTCCTTGTCGATTTAATAGATCAGTACCATAATGGTGTACTGAACTGGGATGAATTCTCATCAGCCGTAAAGGATGCTCATGCCGATCGAATGGGTAGCCAAAATAAAAGGTTGGTAATCCCTGACAAGCCCAAAGAAGAGGATTATTTCTATGCCAACCCACAGGAGTGTTTAGAGGCATCAGACAATCCATTGGCGTTGAGTAGTACATGA 1551 0.4294 MCKPELQDFGYMGSNTWESKVQKVGMGGLGSGSSSGSGSSRSRMKLWMIRATTSVLLWTCIVQLTALGDMWGPRVLKGWPSCFSHESAARAIDVELPSPRPPLLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKTSFWADPSDFQDIFDVDHFITSLRDEVRILKELPPRLKLKVERGFLYTMPPISWSDISYYKNQILPLIQKYKVVHLNRTDARLANNGQPIEIQKLRCRVNFSALRFTSQIEELGRKVIRLLRQNGPFLVLHLRYEMDMLAFSGCTQGCNSDEVEELTRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETALTLKALDIDRSIQIYIAAGEIYGGERRMESLAKEYPKLVRKETLLEPSDLQFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRYLGFKKTILLNRRLLVDLIDQYHNGVLNWDEFSSAVKDAHADRMGSQNKRLVIPDKPKEEDYFYANPQECLEASDNPLALSST* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2927 516 PANTHER OS02G0726500 PROTEIN-RELATED 30 509 - -
Apr9g2927 516 PANTHER GDP-FUCOSE O-FUCOSYLTRANSFERASE-LIKE PROTEIN 30 509 - -
Apr9g2927 516 CDD O-FucT_plant 115 440 IPR024709 -
Apr9g2927 516 PIRSF UCP009360 23 501 IPR024709 -
Apr9g2927 516 Pfam GDP-fucose protein O-fucosyltransferase 115 435 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2927 Apr-Chr9 36133221 36137095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2927 111 513 Miscellaneous Gene Families AT2G37980 50.370 8.95e-135 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2927 K23280 - gmx:100793244 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2927 9 36133221 36137095 Apr9g2927 9 36133221 36137095 ECH