Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2922 ATGTCGCGCACTCGCATTGCCGTTCACCGCTTTCGCTACACCTTCACCGCATCACCACCACCACCATCATCTTCTCCAATTACTCGCTTCCAATTCCAATGTCCCCAACAATATCTCACGCGCTCACCGTTCCATTATTTTCGTTATTCTTCATCCTCCCCTAAACAACGCGATTCAGAATATCCGAGTGGTGACTTTCATTTCGAGCCCGTTACGGGATGGAAAAAGCTCATGGTCAAGCTCAAAATGCTGGTAGCCTTCCCCTGGGAGCGTCTCCGCTACGGCACCGTTTTCACGATCAAGTTGCGCGGCCAGATATCGGATCAGCTGAAGAGTAGATTCTCCCCTGGATTATCTCTGCCTCAAATTTGTGATAATTTCTTCAAAGCTACATATGATCCTCGCATTTCCGGCATCTATCTTCATATCGATATTTTGAATTGCGGTTGGGCCAAGGTCGAGGAAATTCGTAGGCAAATATTGAATTTCAAAAAATCAGGAAAATTTATTGTGGCTTATGTCGCTTCATGTCGAGAAAAAGAGTATTACATTGCATGCGCGTGTGATGAGATATATGCACCTCCAAGTGCTTATTTTTCTTTGTTTGGATTGACCGTTCAAGCCCCGTTCCTCAGAGGTGTTTTAGAGAAACTCGGAATTGAACCTCAAGTGGAAAGAATTGGCAAGTACAAAAGTGTAGGAGATCAACTAACCCGTAGAACCATGTCTGAAGATCATCATGAGATGCTGACTGCATTGCTCGATAATATCTATACAAATTGGCTAGACAAAGTCTCCTCTGCTAGAGGAAAGAAAAGAGAAGATATTGAGAACTTCATAAATGAAGGTGCCTATCAAGTGGACAGGCTTAAAGAAGAGGGCTTCATATCAGACATAATCTATGATGATGAGGTTATCGCCAGGTTGAAAGAAAGACTTCAAGTGAAAAATAAAAATTTGCCTATGGTTGATTACAGAAAATACTCTGGAGTTAGGAAATCAACTATTGGACTCTCGGGTGGCAAAGAGCTGATAGCTATCATCCGAGCCTCAGGGAGCATTCGTCGTATTGAGAGTCCATTAAGTTCCCGTAGCTCAGGTATCATCGGAGAGAAGTTCATTGAGAAGATACGCAGTGTTAGAGAGTCAAAGAAGTATAAGGCTGCTATTATCCGGATTGACAGTCCAGGAGGTGATGCTCTTGCTTCTGATTTGATGTGGAGAGAAATCAGGCTTCTGGCTGCCTCAAAACCAGTCATCGCTTCAATGTCTGATGTGGCAGCAAGTGGAGGGTACTACATGGCAATGGGAGCAGGAGTTATTGTTGCAGAAAATCTTACCTTAACTGGTTCAATTGGAGTGGTCACAGGAAAGCTTAACATTGGGAAACTTTATGAGAAGATTGGCTTTAACAAAGAAATTTTATCAAGGGGTAGATATGCTGAGCTCCGTGCAGCTGAACAACGTTCTTTCAGACCGGATGAAGCAGAATTATTTTCTAAGTCTGCACAGCATGCTTATAAACAATTTCGTGATAAGGCAGCCTTTTCCAGATCTATGACCGTAGACAAAATGGAAGAGGTTGCACAGGGGAGGGTGTGGACTGGTAAGGACGCAGCTTCTCATGGTTTGATTGATGCAATCGGTGGGCTTTCTCGAGCTGTTGCCATAGCAAAATTGAAGGCCAATATACCTCAAGACAGACAGGTTACTATTGTGGAGCTATCACGACCCAGCCCTTCTCTACCCGAGATTTTGAGTGGTCTTGGTAGTTCTCTTGTTGGAGTCGATAGAACTTTAAAGGAACTATTACAGGACTTGACATTTTCCGATGAAGTCCAAGCAAGGATGGACGGAATCATGTTTGAGAAATTGGAAGGATATCCATACGCCAATCCCGTTTTGACATTGATAAAAGATTATCTCAGCTCCCTGTAG 1938 0.4345 MSRTRIAVHRFRYTFTASPPPPSSSPITRFQFQCPQQYLTRSPFHYFRYSSSSPKQRDSEYPSGDFHFEPVTGWKKLMVKLKMLVAFPWERLRYGTVFTIKLRGQISDQLKSRFSPGLSLPQICDNFFKATYDPRISGIYLHIDILNCGWAKVEEIRRQILNFKKSGKFIVAYVASCREKEYYIACACDEIYAPPSAYFSLFGLTVQAPFLRGVLEKLGIEPQVERIGKYKSVGDQLTRRTMSEDHHEMLTALLDNIYTNWLDKVSSARGKKREDIENFINEGAYQVDRLKEEGFISDIIYDDEVIARLKERLQVKNKNLPMVDYRKYSGVRKSTIGLSGGKELIAIIRASGSIRRIESPLSSRSSGIIGEKFIEKIRSVRESKKYKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMSDVAASGGYYMAMGAGVIVAENLTLTGSIGVVTGKLNIGKLYEKIGFNKEILSRGRYAELRAAEQRSFRPDEAELFSKSAQHAYKQFRDKAAFSRSMTVDKMEEVAQGRVWTGKDAASHGLIDAIGGLSRAVAIAKLKANIPQDRQVTIVELSRPSPSLPEILSGLGSSLVGVDRTLKELLQDLTFSDEVQARMDGIMFEKLEGYPYANPVLTLIKDYLSSL* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2922 645 Gene3D - 341 489 - -
Apr9g2922 645 CDD S49_Sppa_N_C 345 559 IPR002142 GO:0006508|GO:0008233
Apr9g2922 645 SUPERFAMILY ClpP/crotonase 88 304 IPR029045 -
Apr9g2922 645 SUPERFAMILY ClpP/crotonase 347 550 IPR029045 -
Apr9g2922 645 TIGRFAM SppA_dom: signal peptide peptidase SppA, 36K type 346 558 IPR004635 GO:0006508|GO:0008233
Apr9g2922 645 Pfam Peptidase family S49 413 563 IPR002142 GO:0006508|GO:0008233
Apr9g2922 645 Pfam Peptidase family S49 163 315 IPR002142 GO:0006508|GO:0008233
Apr9g2922 645 Gene3D - 96 330 - -
Apr9g2922 645 CDD S49_SppA_67K_type 99 311 - -
Apr9g2922 645 PANTHER PROTEASE 4 54 644 - -
Apr9g2922 645 PIRSF Protease_4_SppA 38 645 IPR004634 GO:0006465|GO:0008233|GO:0016021
Apr9g2922 645 Gene3D - 490 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2922 Apr-Chr9 36077047 36086309 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2922 K04773 - gmx:100809623 1096.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2922 9 36077047 36086309 Apr9g2922 9 36077047 36086309 ECH