Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2917 ATGCCTACCGTAAGTGTGGGGCGGGATCGTCTGTTTGCGGCTCTAGGAAAAACATACACGCAAGAGGAATTCGAGGACTTGTGCTTCAGTTTTGGAATCGAGCTCGATGACGTCACCACAGAGAAGGCAATTGTGAGGAAAGAGAAGCATTTGGAAGAAGAAGAAGCTGATGAGGGTGAAGAAGTTATCTACAAAATCGAAGTTCCCGCCAACAGATATGATCTCCTGTGCCTCGAAGGACTTGCTCAAGCCCTCCGAGTTTTCTGTGGGTTCCAAGAGATCCCCACTTACAGATTGTCTGACATTAGTAAGGATTCAATGCTCAAAATGCATGTGAAGCCAGAGACATCTCTGATTCGTCCATATGTTGTATGTGCTGTGTTAAGAGGTGTAACTTTTGATAAAGCTAGATACAACAGCTTTATTGATCTCCAGGACAAGCTTCACCAAAACATTTGTCGGCGAAGAACTCTTGTTGCCATTGGCACTCATGATCTGGATAAATTGGAGGGCCCTTTCACCTATGAGGCTTTACCACCTTCAAGTATAAATTTTACACCACTAAAGCAGGAAAGGAACTTCAGGGCTGATGAGCTAATGGAATTCTACAAATCAGATTTGAAACTGAAGAAATTCTTGCATATAATCGAGGATTCCCCTGTTTACCCTGTTTTGTATGACAGCAGGAGAGCTGTTTTATCGTTACCCCCAATAATCAATGGTGCACATTCAGCCATCACTTTGGAGACAAGGAATGTATTTATTGAATGTACTGCTACTGATCTGACAAAGGCGAAAATTGTTTTAAATACAATGGTAACAGCTTTCTCAGAATATTGTGAAAATAAATTTACCATCGAGCCAGTTGAAGTGATTTCTTCTGATGGAAAGTCGCTCATATATCCTGATTTATCTGTCTACAATATGGAAGTTTCTCTATCTTACATTACCAGATTGATTGGGGTATCATTGGAGGCAGAAGAGGTCACTAAGTTCTTAAATCAGATGCAATTGCATGCCCAGCAGTCTACATCTGGCAGTAAGGAGTCTAAATTTGTTGTATCTGTACCTCCTACTAGAAGTGATGTTCTTCACCCATGTGATGTTATGGAGGACGTTGCAATAGCTTATGGATTCAATGCTGTGAAGGATAAAGCAGTTGTAGATAATAAGGGCTCAGAGAGGTTGGCTGCTTCCTTGACTCTACTTCCTCTGAATGAGCTCAGTGATCTTATCAGAAAAGAGGTTGCAATGATTGGGTTCACAGAGGTCTTGACGTTTATACTCTGCTCTAAAAAGGAAAACTTTGCCATGCTAAATCGCATAGATGATAAATCCAAGGCAGTTATCATTGGAAACCCTAGGTCTTCAGACTTTGAGGCTGTGCGGACTAGTCTTATGCCTGGCATTTTGAAAACTGTTGCTCACAACAAGGATCATCCAAAGCCCATAAAGATTTTTGAAGTTGGTGATATAGCAATTTTGGATGACAAAAATGATGTTGGTGCAAAGAATCTTCGCCAACTTGCTGCTTTGTACTGTGGTGCTAATGCAGGATTTGAGATAATTCATGGCTTGGTGGACAGAGTCATGGAGAAGAATGGGATTACCTTTGTTTCACCTGGTGATAAATCCGGGTATTATATTGAACGATCACATGAACCTGAATTTCTTGCTGGTAGGCAAGCTAGAATCATTTATAAAGAAAAGCATATCGGCACTTTTGGCATTGTTCATCCAGAGGTATTAAACAACTTCGACATTCCTGATCCTTGCTCCTTTGTTGAGCTTAACATCGAAAGTTTGTTATGA 1812 0.4089 MPTVSVGRDRLFAALGKTYTQEEFEDLCFSFGIELDDVTTEKAIVRKEKHLEEEEADEGEEVIYKIEVPANRYDLLCLEGLAQALRVFCGFQEIPTYRLSDISKDSMLKMHVKPETSLIRPYVVCAVLRGVTFDKARYNSFIDLQDKLHQNICRRRTLVAIGTHDLDKLEGPFTYEALPPSSINFTPLKQERNFRADELMEFYKSDLKLKKFLHIIEDSPVYPVLYDSRRAVLSLPPIINGAHSAITLETRNVFIECTATDLTKAKIVLNTMVTAFSEYCENKFTIEPVEVISSDGKSLIYPDLSVYNMEVSLSYITRLIGVSLEAEEVTKFLNQMQLHAQQSTSGSKESKFVVSVPPTRSDVLHPCDVMEDVAIAYGFNAVKDKAVVDNKGSERLAASLTLLPLNELSDLIRKEVAMIGFTEVLTFILCSKKENFAMLNRIDDKSKAVIIGNPRSSDFEAVRTSLMPGILKTVAHNKDHPKPIKIFEVGDIAILDDKNDVGAKNLRQLAALYCGANAGFEIIHGLVDRVMEKNGITFVSPGDKSGYYIERSHEPEFLAGRQARIIYKEKHIGTFGIVHPEVLNNFDIPDPCSFVELNIESLL* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2917 603 SUPERFAMILY Putative DNA-binding domain 308 383 IPR009061 -
Apr9g2917 603 SMART B5_2 306 379 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Apr9g2917 603 Gene3D - 101 305 IPR020825 -
Apr9g2917 603 Pfam Phenylalanyl tRNA synthetase beta chain CLM domain 404 599 IPR041616 -
Apr9g2917 603 Gene3D - 1 89 - -
Apr9g2917 603 Pfam Phe-tRNA synthetase beta subunit B1 domain 1 89 IPR040659 -
Apr9g2917 603 Pfam B3/4 domain 120 281 IPR005146 GO:0003723|GO:0004826
Apr9g2917 603 SMART B3_4_2 119 281 IPR005146 GO:0003723|GO:0004826
Apr9g2917 603 ProSiteProfiles B5 domain profile. 304 384 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Apr9g2917 603 CDD PheRS_beta_core 404 602 IPR041616 -
Apr9g2917 603 Pfam tRNA synthetase B5 domain 309 379 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Apr9g2917 603 TIGRFAM pheT_arch: phenylalanine--tRNA ligase, beta subunit 1 603 IPR004531 GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432
Apr9g2917 603 SUPERFAMILY Putative DNA-binding domain 5 95 IPR009061 -
Apr9g2917 603 Gene3D - 307 382 - -
Apr9g2917 603 Gene3D Bira Bifunctional Protein; Domain 2 403 603 IPR045864 -
Apr9g2917 603 SUPERFAMILY Class II aaRS and biotin synthetases 377 602 IPR045864 -
Apr9g2917 603 PANTHER PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 1 602 IPR045060 GO:0004826|GO:0006432
Apr9g2917 603 PANTHER PHENYLALANINE--TRNA LIGASE BETA SUBUNIT 1 602 - -
Apr9g2917 603 SUPERFAMILY PheT/TilS domain 220 281 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2917 K01890 - gmx:100805249 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2917 9 36011312 36019687 Apr9g2917 9 36011312 36019687 ECH