LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr9g2901	ATGCCGGTTTCAACGCGGTCTCAAATCACCACCACCACCACCAACCATGGCGAAAACGAACCAAACCCGACAACAACACAGAGACTGAGAAACCCTCACCATGGCCTAAAGGAGAAGCTGAAGACGCTCACTCTTTTATACGAGCAACAGAAGCAAGCTTCTGTAGCTCTCAAGAACGGGTCTTTAAGACCCCCACAAGAGAAAAACGTGATGCGAGAAAACACAATGCCCAACACAACAATCACAAGAACCTTTGTGTTACCTCAACCACCCTCAAACGACGAAGATGCTAAGGAGAATATAGTTGTTGGGTCTGATAGAATTGTCGGGTTTTCGTGCCCACGAAAGACAACATCAACAACAACGAATGTTTGTGTCTCGAGTTCTGCTACCGTGGCACGGAAACTGTCGATGGGGATGGTTCAAGAGTTTGAGAAGGTTGACGCGGTTTCGGAGAAGCAAGGGAAGGTTGGGAGTAGGATCCTTGTGTTCGTGAGGCTTAGGCCTATGAACAAGAAGGAAAAGGAAGCGGAGTCACGGTGCTGTGTCAGAATCGTTAATCGCCGTGACGTTTATCTAACGGAGTTTGCCAATGAAAACGATTATCTCAGACTTAATAGGCTTCGTGGACGCCACTTTACCTTCGATGCCGCGTTTCCTGATTCCTCAACTCAACAAGAAGTTTACTCCACCACAACCTCAGAACTTGTGGAAGCGGTTCTGCAAGGGAGGAATGGATCGGTTTTCTGTTATGGAGCAACGGGGGCTGGGAAGACTTACACAATGCTTGGGACAGTGGAGAATCCAGGGGTGATGGTTTTGGCAATTAAGGATCTTTTCAGTAAAATCAAGCAGAGAAGTTTTGATGGAAGCCATGTGGTTCATCTCTCTTATCTTGAGGTTTATAATGAAACTGTTAGGGATTTGCTCTCCCCTGGAAGGCCTCTTGTTCTTAGAGAAGATAAACAGGGGATTGTAGCGGCATGCCTTACACAATACAGAGCTTATTCCACTGATGAAGTGATGGCATTGCTTCAGCAAGGAAATCAGAACCGAACTACAGAACCAACTCGTGCAAACGAAACATCTTCACGTTCCCATGCAATTTTGCAGGTTGTGGTAGAATACCGAGTTAGAGATGCTTCAATGAATATTGTTAACCGTGTGGGCAAGCTCTCATTAATTGATCTTGCAGGATCAGAGAGAGCTCTTGCCACGGATCAAAGAACTCTTAGATCTCTTGAAGGTGCCAATATAAACCGGTCTCTTCTTGCACTGAGCAGTTGCATTAATGCTCTTGTAGAGGGCAAGAAACACATACCATATAGAAATTCAAAACTCACTCAGCTTCTCAAGGATTCACTAGGAGGAATTTGTAACACTGTCATGATTGCAAACATAAGCCCAAGTAACCTCTCATTTGGTGAAACTCAGAACACAGTTCACTGGGCTGATAGAGCCAAGGAGATTCGTGCAAAGGTAAGTGATGCAAATGAGGATCAATTACCAGTGCCTGAGACAGAAACTGACCAGACCAAGCTTGTACTTGAGCTGCAAAAGGAGAATCGTGATTTGAGAATACAATTAGCAAGGCAGCAACAGAAGTTCTTGACCCTCCAAAAACAATCCTTAGCTTCACATGCCTCACCAACACCACCTTCAGCTGGATCACTTTCCACTCCTCCAACTTCTGCTCAACCAATTGAAAAAAGAAGGGCTAGAACCTCTTTCTTGGCTGGAACTTGTTTCACTCCAGAAACCAAGAAGAAGGGACCTGAACTAGCTGTCAAGACACTTCAACGAACCGTAAAAGCACTTGAGGCAGAGATAGAGAGACTGAAGAAAGATCATAGCTTGCAGCTAAAGCAAAAGGATGATCTTATTTACGAGCTCTCACAAAAGGGTGGAAAACAAACATTAACAACAATGGAGGTGGGAAAGGGAGTGATGACCAGGGCTAAGGATCCACACAATAGTGAGATGAAGAGTCCAAGTCAACGTTTTCGATCACCAGCACCAACTGCCAAGAAACGAAGCTTTTGGGACATAACCACAACTAATAGTCCATCAGTTACTACATTAAATGGGAGAAAAACTAGAAGTCATGTCCTTGCTGAACCTACTGCACCTCCTCCATCCTTGCTTCTTCAGCCTGGTTTTGCTCGTCAAAAAGCCAATATTTAA	2184	0.4478	MPVSTRSQITTTTTNHGENEPNPTTTQRLRNPHHGLKEKLKTLTLLYEQQKQASVALKNGSLRPPQEKNVMRENTMPNTTITRTFVLPQPPSNDEDAKENIVVGSDRIVGFSCPRKTTSTTTNVCVSSSATVARKLSMGMVQEFEKVDAVSEKQGKVGSRILVFVRLRPMNKKEKEAESRCCVRIVNRRDVYLTEFANENDYLRLNRLRGRHFTFDAAFPDSSTQQEVYSTTTSELVEAVLQGRNGSVFCYGATGAGKTYTMLGTVENPGVMVLAIKDLFSKIKQRSFDGSHVVHLSYLEVYNETVRDLLSPGRPLVLREDKQGIVAACLTQYRAYSTDEVMALLQQGNQNRTTEPTRANETSSRSHAILQVVVEYRVRDASMNIVNRVGKLSLIDLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGICNTVMIANISPSNLSFGETQNTVHWADRAKEIRAKVSDANEDQLPVPETETDQTKLVLELQKENRDLRIQLARQQQKFLTLQKQSLASHASPTPPSAGSLSTPPTSAQPIEKRRARTSFLAGTCFTPETKKKGPELAVKTLQRTVKALEAEIERLKKDHSLQLKQKDDLIYELSQKGGKQTLTTMEVGKGVMTRAKDPHNSEMKSPSQRFRSPAPTAKKRSFWDITTTNSPSVTTLNGRKTRSHVLAEPTAPPPSLLLQPGFARQKANI*	728

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr9g2901	727	Coils	Coil	515	542	-	-
	Apr9g2901	727	MobiDBLite	consensus disorder prediction	1	30	-	-
	Apr9g2901	727	Gene3D	Kinesin motor domain	152	496	IPR036961	-
	Apr9g2901	727	MobiDBLite	consensus disorder prediction	541	569	-	-
	Apr9g2901	727	MobiDBLite	consensus disorder prediction	1	33	-	-
	Apr9g2901	727	Coils	Coil	596	623	-	-
	Apr9g2901	727	PANTHER	KINESIN-RELATED	143	720	IPR027640	GO:0003777\|GO:0007018
	Apr9g2901	727	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	160	535	IPR027417	-
	Apr9g2901	727	MobiDBLite	consensus disorder prediction	704	727	-	-
	Apr9g2901	727	ProSiteProfiles	Kinesin motor domain profile.	160	490	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Apr9g2901	727	PRINTS	Kinesin heavy chain signature	243	264	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Apr9g2901	727	PRINTS	Kinesin heavy chain signature	357	374	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Apr9g2901	727	PRINTS	Kinesin heavy chain signature	391	409	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Apr9g2901	727	PRINTS	Kinesin heavy chain signature	440	461	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Apr9g2901	727	MobiDBLite	consensus disorder prediction	653	676	-	-
	Apr9g2901	727	PANTHER	KINESIN-LIKE PROTEIN	143	720	-	-
	Apr9g2901	727	Pfam	Kinesin motor domain	166	490	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Apr9g2901	727	ProSitePatterns	Kinesin motor domain signature.	390	401	IPR019821	GO:0003777\|GO:0005524\|GO:0007018
	Apr9g2901	727	SMART	kinesin_4	158	498	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr9g2901	Apr-Chr9	35912894	35916725	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr9g2901	161	529	Miscellaneous Gene Families	AT2G21380	35.829	4.17e-56	206

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr9g2901	K10401		-	gmx:100798358	1208.36

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr9g2901	9	35912894	35916725	Apr9g2901	9	35912894	35916725	ECH