Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2890 ATGGCGAAACCTCGCAAGCCGAAGAACGAAGACCCCAAACCCGAAAACTCTGGCGCCCTAGTTCACCACCAAAAGCTATGCCTATCCATCGACATGGACAAACGCCTAGTCTACGGGTATACTGAATTGGAAATTGCGGTGCCGGAGATTGGTATCGTTGGGTTGCACGCGGAGAACTTAGTGATTGAAAGTGTTTGGGTTGATGGTGAGCCCACGGAATTCGAGTATTACCCCCATCATCAGCAACAGTTGGATGATGAAAAGAGATTTAGCTCGGTGTGTTCTCCTAGCTCTGCTGCTGATGCTGCTGTCTCAGTGTACATGTCCGCTCTGGAGAAGGAACTGGTTCCCAATTTACTCATCAATTGCTGTAAACCTTCTAAGACTGAAAGTGAACCACAGGAACAACCCACTTCTGACAATGGGTTTCACGCCTCGGCCGAGCCCAAGCAGAATGTGAGAATTGTTCGCATTGACTATTGGATAGAGAAGGCAGAGACAGGAATCCACTTCAGAAGCAATGTTCTTCATACCGATAACCAGATAAGGAGAGCAAGGTGTTGGTTTCCATGCATAGATGACAATTCACAACGATGCTGCTATGACCTGGAATTCACTGTAGCATACAATCTTGTGGCTGTCAGCACGGGAAGCTTGCTATATCAGGTCTTGAGCAAGGACAATCCTCCTCGGAAAACATATGTCTATAAATTGGATGTTCCAGTTTCTGCGAGTTTTGTATCACACATGTGTATGCTGCCTAATCTGTCAAAGATGCGGAATACAATGGAGTTTTTCCACAGTGCCTTCAGCTGCTATAAGGATTATCTTTCTGTAGACTTCCCATTTGAATCATATACGCAAGTTTTCATAGAGCCAGAGATCGCAGTTTCATCATTGAGTTCAGGAGCTTCTATGAGTATATTTAGTTCTCAAGTTTTGTTTGATGATAAGGTTATTGACCAGACTATTGATACAAGGGTAAAACTTGCCTATGCCCTTGCACTTCAGTGGTTTGGTGTGTATATCACTGCTGAGGCCCCAAATGATGAGTGGCTCTTGGACGGGCTCGCTGGTTTCTTGACCGATTTTTTTATTAAGAAACATTTGGGAAATAATGAGGCACGGTACCGGAGATACAAGGCAAATTGTGCTGTTTGCAAAGTTGATAACAGTGGAGCAACAGCTTTGAGCTGTTCTGCTTCCTGTAAGGATTTATATGGAACTCAGAGCATTGGTTTGTATGGAAAAATAAGATCATGGAAGTCTGTGGCAGTTCTCCAGATGTTGGAAAAGCAAATGGGTCCTGAATCTTTCCGAAGGATTTTGCAAACTATAGTTTCTCGGGCTCAAGATAAAACACGTTCTGTGAAAACTCTTAGTACTAAGGAGTTTCGACATTTTGCTAATAAGGTTGGAAATCTTGAACGTCCATTTCTTAAAGATTTCTTCCCTCGGTGGGTTGGTTCTTGTGGGTGTCCTGTTTTAAGGATGGGGTTTTCCTATAACAAAAGGAAGAACATGGTTGAATTGGCAGTGTTGCGAGGATGCACAGCTTTGCAGACTTCAAGTACATCCATTGTTGATGGTAACCCAGATACTGAAAATCGAGATGGAGATACTGGATGGCCTGGTATGATGAGCATCAGGGTTTATGAACTTGATGGTATGTATGACCATCCAATTCTACCAATGGCTGGAGAATCATGGCAACTATTGGAAATACAGTGTCACTCAAAGCTCGCAGCAAGACGCTTTCAAAAGCCTAAGAAAGGTGTAAAACCTGATGGCTCTGATGATAATGGTGACGTGCCCTCCATGGATATGCGTTCCAATACCGAGTCTCCATTGTTGTGGATCAGAGCAGATCCTGATATGGAGTACCTTGCTGAGGTTCATTTTAACCAACCAGTTCAGATGTGGATTAATCAATTAGAGAAGGACAAAGATGTTATTGCTCAGGCACAAGCAATTGCAGCCCTTGAGGCATCACCACAGCTATCATTTTCTGTTGTAAATGCCCTAAACAATTTTCTTAGTGACTCCAAGGCATTTTGGAGAGTACGCATTGAAGCGGCGTTTGCATTGGCAAGTTTAGCATCTGAGGAAACTGATTTTTCTGGTCTACTACATTTGGTGAAATTTTACAAGAGTCGAAGGTTTGATCCTGACATTGGACTCCCAAAGCCAAATGACTTTCATGATTTTGCTGAGTATTTTGTTCTTGAGGCCATTCCACATGCTGTAGCTATGGTCAGAGCTGCCGACAAGAAAAGCCCAAGAGAGGCGATCGAGTTTGTTTTACAGCTATTGAAGTACAATGACAACAATGGGAACCCTTACTCAGATGTTTTCTGGCTTGCTGCATTGGTCCAGTCAGTTGGCGAGCTTGAGTTCGGGCAACAGAGTATTCTCTTATTGTCATCTCTTCTCAAACGCATTGACCGTCTGCTACAATTTGATAGTCTCATGCCTAGCTACAATGGAATCTTGACTATCAGTTGTATCCGGACATTGACCCAGATTGCTTCAAAGCTTTCGGGATTCATTCCTCTTGATCGAGTGTATGAACTTGTAAAGCCTTTTCGAGACTTAAAGGCATTGTGGCAAGTCCGAATTGAAGCAAGTAGAGCACTACTTGATCTTGAATTCCACTGCAAGGGCTTGGAGTCAGCGTTGCTTTTATTTATCAAATACATAGAGGAGGAGCATTCCTTAAGAGGGCAGTTAAAACTTGCCACCCATGTTATGAGGCTATGTCAGATGAAGGATGGATCAAATTCCAATGATGAAATTACAAACCAAACTCTTGTCTCTATGCTTAATTTACTGGAAGGGCGTATGGCATTTAATAATGTCTTTCTTCGTCACTACTTGTTCTGCATATTACAAATACTTGCAAGAAGACCTCCTACTCTTCATGGAATTCCCAGAGAAAATAGGGCATTGCATATGAGTCTCACAGATGCTTGTAACTATCAGAACATTTTTGTTCTGGAATCAGAAAGCAAACCTTTGGATCTGCCAAGCTCTACCCAAAATCTTACGCAAGATTTGGGCACAACTGAGGGTTTGAGGGATGCAGTTGATGAAGCTCCTAAGGACAAACCCTGTGAAGATCCCCCACAAACACATGTTGAAGCTGTAAAGGAAGCGCCCCTAGAGACTCCCAAAGAGGTATTTACGGAATTTGCCCAGGAAGCACCAATTGAAGCTCCAAATGAAGTTTCTAAGGAAGCTGATACCATTTCCAATAGCCATGACAGAAAGAGGCGAATTAAAATCAAGGTCAAACAATCTTCTGCCACCAGTAGGGCTGATACTGATAATCAAGTGGTTGAACGATCTTTAGGTGGTCGTAATGAAATGGATCATGGAGCTAGCAGTTCAGTTTCTGTAGATGCACCCCAGAGGAATTTTGCAGAAACTATTAGCATTGGTAATACCAATATTGAGGAGGTCAATTCTTGGCATGATCGAGGTTCTCGCATGACTGCCAGCATTGGTAGTGCAAAATTTTTGAGTGATGGTGATGAATTAGGCAAAGAACTCCAGTGCACTGCTGATTCTAGTGTAGTTTATTCACAACCTCAGCCAGAAGACCCATCATCATCCAGTATTATCCAGGATAATAATATAGATGTTGATGCACGTCGATATGCCAGTCTTCAAACTCTTTCAGTTGCAAGATTTGATCTTGATGGAGAATCATTGGGTAAAGAAAATTCTGCTCGTGGGAAAGAAAAGCACAAAAGCAAGGAAAAAAAGCGGAAACGGGAAAATCATAAAGGACACCATGATGATCCAGAATATTTGGAGCGAAAACGATTAAAGAAAGAGAAGAAACGGAAGGAAAAAGAAATGGCAAAATTACAGAGTGATGAAGCAAAGAGGTCCTCCATAGACTCTCTAAGTAAAAAAGAGGCACCTGAAGCAGACGTTTCAAGACAGTTGAAATCTATTGAACCCAGCGGCTATAATTCTAAATTAGAAATCAGAAACACCAAACCGGAGGCATCCGAAGGTACATCTGGTGCCCCAAAAATTCGAATTAAAATTAAGAACCGAATGCTCAATAAGTCATAG 4086 0.4239 MAKPRKPKNEDPKPENSGALVHHQKLCLSIDMDKRLVYGYTELEIAVPEIGIVGLHAENLVIESVWVDGEPTEFEYYPHHQQQLDDEKRFSSVCSPSSAADAAVSVYMSALEKELVPNLLINCCKPSKTESEPQEQPTSDNGFHASAEPKQNVRIVRIDYWIEKAETGIHFRSNVLHTDNQIRRARCWFPCIDDNSQRCCYDLEFTVAYNLVAVSTGSLLYQVLSKDNPPRKTYVYKLDVPVSASFVSHMCMLPNLSKMRNTMEFFHSAFSCYKDYLSVDFPFESYTQVFIEPEIAVSSLSSGASMSIFSSQVLFDDKVIDQTIDTRVKLAYALALQWFGVYITAEAPNDEWLLDGLAGFLTDFFIKKHLGNNEARYRRYKANCAVCKVDNSGATALSCSASCKDLYGTQSIGLYGKIRSWKSVAVLQMLEKQMGPESFRRILQTIVSRAQDKTRSVKTLSTKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPVLRMGFSYNKRKNMVELAVLRGCTALQTSSTSIVDGNPDTENRDGDTGWPGMMSIRVYELDGMYDHPILPMAGESWQLLEIQCHSKLAARRFQKPKKGVKPDGSDDNGDVPSMDMRSNTESPLLWIRADPDMEYLAEVHFNQPVQMWINQLEKDKDVIAQAQAIAALEASPQLSFSVVNALNNFLSDSKAFWRVRIEAAFALASLASEETDFSGLLHLVKFYKSRRFDPDIGLPKPNDFHDFAEYFVLEAIPHAVAMVRAADKKSPREAIEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILLLSSLLKRIDRLLQFDSLMPSYNGILTISCIRTLTQIASKLSGFIPLDRVYELVKPFRDLKALWQVRIEASRALLDLEFHCKGLESALLLFIKYIEEEHSLRGQLKLATHVMRLCQMKDGSNSNDEITNQTLVSMLNLLEGRMAFNNVFLRHYLFCILQILARRPPTLHGIPRENRALHMSLTDACNYQNIFVLESESKPLDLPSSTQNLTQDLGTTEGLRDAVDEAPKDKPCEDPPQTHVEAVKEAPLETPKEVFTEFAQEAPIEAPNEVSKEADTISNSHDRKRRIKIKVKQSSATSRADTDNQVVERSLGGRNEMDHGASSSVSVDAPQRNFAETISIGNTNIEEVNSWHDRGSRMTASIGSAKFLSDGDELGKELQCTADSSVVYSQPQPEDPSSSSIIQDNNIDVDARRYASLQTLSVARFDLDGESLGKENSARGKEKHKSKEKKRKRENHKGHHDDPEYLERKRLKKEKKRKEKEMAKLQSDEAKRSSIDSLSKKEAPEADVSRQLKSIEPSGYNSKLEIRNTKPEASEGTSGAPKIRIKIKNRMLNKS* 1362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2890 1361 Gene3D - 634 905 IPR011989 -
Apr9g2890 1361 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 18 1295 IPR037813 GO:0005669
Apr9g2890 1361 SUPERFAMILY ARM repeat 427 970 IPR016024 -
Apr9g2890 1361 MobiDBLite consensus disorder prediction 1231 1361 - -
Apr9g2890 1361 Coils Coil 1272 1299 - -
Apr9g2890 1361 MobiDBLite consensus disorder prediction 1234 1248 - -
Apr9g2890 1361 MobiDBLite consensus disorder prediction 1284 1315 - -
Apr9g2890 1361 Gene3D tricorn interacting facor f3 domain 19 247 IPR042097 -
Apr9g2890 1361 MobiDBLite consensus disorder prediction 1069 1136 - -
Apr9g2890 1361 MobiDBLite consensus disorder prediction 1320 1341 - -
Apr9g2890 1361 MobiDBLite consensus disorder prediction 1188 1211 - -
Apr9g2890 1361 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 18 247 IPR042097 -
Apr9g2890 1361 MobiDBLite consensus disorder prediction 589 603 - -
Apr9g2890 1361 MobiDBLite consensus disorder prediction 127 146 - -
Apr9g2890 1361 MobiDBLite consensus disorder prediction 586 610 - -
Apr9g2890 1361 Gene3D Neutral Protease Domain 2 248 492 IPR027268 -
Apr9g2890 1361 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 255 497 - -
Apr9g2890 1361 MobiDBLite consensus disorder prediction 1099 1115 - -
Apr9g2890 1361 MobiDBLite consensus disorder prediction 1261 1276 - -
Apr9g2890 1361 Pfam Peptidase family M1 domain 263 461 IPR014782 GO:0008237|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2890 K03128 - gmx:100792795 2372.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2890 9 35823549 35842864 Apr9g2890 9 35823549 35842864 ECH