Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2884 ATGGGTACTGGAGCACTCGAAACGAATCGTTTAACGAATGGGGAAGCTGAGAACAGTCTTCACAAGCAAGCTGATCGGGCTTCTCCGCGCGAGGACTTGCTTTCTGATGGCAATGATGCAGTTTCAGACCCTGAGGAGCTATCGGAATCACACACTCTTCAGCTTGAAGCCAAGCCGCACCCTGATGCTCCTGCGAAGAGGGCCAGGTTGCCGAAGGAATTGACGTTTCAGGACATGTATCAAAACCATGGAATGTTTGATGATGACGACGACGATGATGACAGTGACTGGGAGCCGTTTCAGATTCCCAAGTGTGTGGAAGTTGTCAAGTGGTTCTGCAAAAATTGTACCATGGTTAATGTAGACGAAGTTGACTGCTGCGAAATATGCGGGGAGCATAAAGACTCTAAAATTCTCAATTATGGGTTTTTTGCATCTCCATTTGCCCAAGACGAGGATCTGACTGAGATCCAGGCAAATAATGTAAAAGGATTGAAAGATGTTGGCTCACAGGAATCAGTGGCAGATAGTTCTACTGCAATTGGTTTTGACGAGAGAATGTTGTTACATGCAGAAGTTGAAAAGAAATTGCACCCACACCCTGAAAGGCCAGATCGTCTTCGAGCCATTGCTGCTAGTCTTGCTAGAGCTGGAATATTTCCTGGAAGATGCTATTCAATTCCTGCTAGAGAAATCACACTTGAAGAACTTTTTATGGTTCATTCTTCTGAGCATATTGAATCTGTGGAAATTACAAGCGAATCAATGTCTAGTTATTTCACTGCAGACACATATGCCAATGAGCATTCAGCATGTGCTGCTAGGTTGGCAGCTGGGTTATGTGCTGATCTGGCATCAGCAATTGTTTCTGGGCATGCCAAAAATGGATTTGCTTTGGTTAGACCTCCTGGTCATCATGCTGGTATTAGACATGCGATGGGATTCTGCCTTCACAATAATGCTGCAGTGGCAGCATTGGCAGCTCAGGCTGCTGGGGCTAGGAAGGTTCTAATTTTAGATTGGGATGTCCATCATGGAAATGGGACACAGGAAATATTTGAGCAAAACAAATCGGTCTTGTATATATCATTGCATAGACATGAGGGAGGAAACTTTTATCCTGGTACAGGAGCTGCTGATGAGGTTGGTAGTATGGGTGCAGAAGGATACTGTGTGAATATTCCATGGAGCCGAGGAGGAGTTGGTGACAATGACTACAATTTTGCATTTCAGCATGTTGTCCTTCCTATAGCTTCTGAGTTTGCTCCAGATTTTACCATAATATCAGCTGGATTTGATGCTGCAAGAGGTGATCCCCTAGGATGTTGCGATGTTACTCCCTCTGGCTATGCACAGATGACCCGCATGTTGAATGCTCTTTCTGGTGGAAAATTGCTTGTTATTCTTGAGGGGGGCTATAATCTTCGCTCTATATCATCTTCAGCAACTGCTGTTATCAAGGTACTGCTGGGTGAAAATCCTGAATGTGATCCGGAGAATAGTTTTCCTTCCAGAGCTGGACTGCAAACTGTTCTGGAAGTCCTTAAAATTCAGATGAACTTTTGGCCTTCCTTGGGACCGATGTTTATGAATTTGCAGTCACAATGGAAAATGTACTGTTTAAGAAAAAAAAGGAAACAGATTAAGAAGAGACGCCGACTTCTGGTGCCAATGTGGTGGCGGTGGGGACGAAAAAGTTTCTTATTCCATTTCCTGAACGACCATCTTAGTGTAAAATCAAAGTGA 1746 0.4416 MGTGALETNRLTNGEAENSLHKQADRASPREDLLSDGNDAVSDPEELSESHTLQLEAKPHPDAPAKRARLPKELTFQDMYQNHGMFDDDDDDDDSDWEPFQIPKCVEVVKWFCKNCTMVNVDEVDCCEICGEHKDSKILNYGFFASPFAQDEDLTEIQANNVKGLKDVGSQESVADSSTAIGFDERMLLHAEVEKKLHPHPERPDRLRAIAASLARAGIFPGRCYSIPAREITLEELFMVHSSEHIESVEITSESMSSYFTADTYANEHSACAARLAAGLCADLASAIVSGHAKNGFALVRPPGHHAGIRHAMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAADEVGSMGAEGYCVNIPWSRGGVGDNDYNFAFQHVVLPIASEFAPDFTIISAGFDAARGDPLGCCDVTPSGYAQMTRMLNALSGGKLLVILEGGYNLRSISSSATAVIKVLLGENPECDPENSFPSRAGLQTVLEVLKIQMNFWPSLGPMFMNLQSQWKMYCLRKKRKQIKKRRRLLVPMWWRWGRKSFLFHFLNDHLSVKSK* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2884 581 PRINTS Histone deacetylase superfamily signature 302 325 IPR000286 -
Apr9g2884 581 PRINTS Histone deacetylase superfamily signature 335 350 IPR000286 -
Apr9g2884 581 PRINTS Histone deacetylase superfamily signature 423 433 IPR000286 -
Apr9g2884 581 PANTHER HISTONE DEACETYLASE-RELATED 46 580 - -
Apr9g2884 581 MobiDBLite consensus disorder prediction 19 37 - -
Apr9g2884 581 ProSitePatterns Zinc finger RanBP2-type signature. 111 130 IPR001876 -
Apr9g2884 581 Gene3D Histone deacetylase domain 172 549 IPR037138 -
Apr9g2884 581 MobiDBLite consensus disorder prediction 1 18 - -
Apr9g2884 581 Pfam Histone deacetylase domain 200 488 IPR023801 -
Apr9g2884 581 PANTHER HISTONE DEACETYLASE 46 580 - -
Apr9g2884 581 MobiDBLite consensus disorder prediction 44 66 - -
Apr9g2884 581 SUPERFAMILY Arginase/deacetylase 177 524 IPR023696 -
Apr9g2884 581 MobiDBLite consensus disorder prediction 1 66 - -
Apr9g2884 581 CDD HDAC_classII 200 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2884 Apr-Chr9 35750039 35757941 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2884 - - gmx:100804724 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2884 9 35750039 35757941 Apr9g2884 9 35750039 35757941 ECH