Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2813 ATGGTGACGATTACTGCTTGGATCACTGACCTTTTCGCCTGTATGGGTGGTTGTTTTGGATGCTGTATGAAACCCACACCAATTATTGCTGTGGATGAGCCGGCCAAGGGACTAAGAATTCAGGGGCAGACAGTGAGAAAACCAAATATATCAGATGGTTTCTGGAGTTCAAGCACTTGTGATCTGGATAACAGCACCATTCAATCTCAGAGAAGTATCTCATCTGTCAGTACATTAAATCAACTTCTCAATCAGAGCAGTGGAACTTCTACTGCAGGCACCAATACTGAATTTGTAAACCAAGGTCTTCTTCTCTGGAATGAAAGCAGGCTTCAGTGGATTGGAAGTGGCAAATCTAGGAAGCAAAGCCAACAAAAACGAGAACCCAAACTAAATTGTAATGCTACTTATGAAAGTTTGCTTGGGACTAGACAACCTTTCCCTAAGCCCTTACCTTTATATGAGATGGTGGAATTCCTTGTGGATGTTTGGGAGCGTGAAGGGATGTATGGTTGA 516 0.4283 MVTITAWITDLFACMGGCFGCCMKPTPIIAVDEPAKGLRIQGQTVRKPNISDGFWSSSTCDLDNSTIQSQRSISSVSTLNQLLNQSSGTSTAGTNTEFVNQGLLLWNESRLQWIGSGKSRKQSQQKREPKLNCNATYESLLGTRQPFPKPLPLYEMVEFLVDVWEREGMYG* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2813 171 Pfam Protein of unknown function (DUF4050) 133 170 IPR025124 -
Apr9g2813 171 Pfam Protein of unknown function (DUF4050) 58 129 IPR025124 -
Apr9g2813 171 PANTHER DUF4050 FAMILY PROTEIN 3 170 - -
Apr9g2813 171 PANTHER OS07G0479600 PROTEIN 3 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2813 Apr-Chr9 35116679 35119849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2813 - - gmx:100813288 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2813 9 35116679 35119849 Apr9g0174 9 2268721 2271786 ECH
Apr9g2813 9 35116679 35119849 Apr9g2813 9 35116679 35119849 ECH