Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2480 ATGAGTTTCATCTTCGGAAAAAAGAAAACACCCGCAGAACTTCTGCGGGAAAACAAGAGAATGTTGGATAAATCAATTAGAGAAATAGAACGAGAGAGACAGGGTTTGCAGTCACAAGAGAAGAAACTGATTTTGGAGATAAAGAAAAGTGCCAAACAAGGCCAGATGGGAGCTGTTAGAGTGATGGCAAAAGATCTTGTTAGAACAAGGCATCAGATTGATAAGTTTTATAAGCTCAAGTCACAGCTCCAGGGTGTCTCCCTCAGAATTCAAACTTTGAAGTCAACACATGCAATGGGTGAGGCAATGAAAGGTGTGACTAAGGCAATGGGACAGATGAATAGGCAGATGAACTTGCCGTCTTTGCAGAAAATCATGCAAGAATTTGAGAGACAGAATGAGAAGATGGAATTGGTGACAGAGGTGATGGGAGATGCAATAGATGATGCTTTGGAAGGGGATGAGGAAGAAGAAGAAACAAAAGAACTAGTGAACCAGGTTCTTGATGAGATTGGAATTGACATAAACCAAGAGCTTTTGAATGCTCCATCTGCAGCTATTGCTGCCCCAGCTGCAAAGTCTAAGGTCCCTCAAGTTGAAACTACTGGGAACGATGATGCCGCCATAGATAGCGATTTACAAGCAAGGCTAGACAATTTAAGGAGAATGTAA 672 0.4182 MSFIFGKKKTPAELLRENKRMLDKSIREIERERQGLQSQEKKLILEIKKSAKQGQMGAVRVMAKDLVRTRHQIDKFYKLKSQLQGVSLRIQTLKSTHAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELVTEVMGDAIDDALEGDEEEEETKELVNQVLDEIGIDINQELLNAPSAAIAAPAAKSKVPQVETTGNDDAAIDSDLQARLDNLRRM* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2480 223 Coils Coil 217 223 - -
Apr9g2480 223 MobiDBLite consensus disorder prediction 188 212 - -
Apr9g2480 223 Pfam Snf7 17 186 IPR005024 GO:0007034
Apr9g2480 223 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 223 IPR005024 GO:0007034
Apr9g2480 223 Coils Coil 12 46 - -
Apr9g2480 223 Gene3D - 6 180 - -
Apr9g2480 223 Coils Coil 119 139 - -
Apr9g2480 223 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 1-LIKE 1 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2480 Apr-Chr9 32105964 32108730 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2480 K12191 - zju:107424137 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2480 9 32105964 32108730 Apr9g2480 9 32105964 32108730 ECH
Apr9g2480 9 32105964 32108730 Apr1g2394 1 33582183 33584823 PCT