Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2341 ATGACGTTGGTCGGACTTTTCGTTGCCGCCACGAAGCTCGCCGGAGCTCTGGTGACTCTCACCGTAGCCGCCAACGCCTTTTCATTCTCTCGTTTCCGCAACAAAAACCTTCGCCCTTTCCGTTCTCCCATTGACGAGTCCTCTCCCACTGTCGCACTCTTCAACGTCACAGAAGGAGAAGATGGGTTTTTCTTTGGTTTGGCGACAGCGCCAGCACATGTTGAGGATAGGCTTGACGATGCTTGGATTCAATTTGCTGAACAGAAGAGTGGTGAAGGTGATGGTGAAGAGGGGAAGCAGAGGGTGGATGCTGTGATGGGTTCTGCTGGTGGCGACGGTGGGTCCCACCAGGGTGCGTCATCACAAGTTAACAAGGGGAAGAAGCCTCTTAAGGTTGCGATGGAGGCCATGATTAGAGGCTTTGAGAAGTACATGGAAGTAGAAGGCCAAGAAGGAGAAGAAGAAACCCGTCCTAATGTAACTGCGTGGCATAATGTTCCTTACCCGGAGGAGAGGTTAAGGTTTTGGTCTGAACCTGATACAGAACTAAAATTGGCCAAGGATACTGGTGTTACTGTTTTCCGAATGGGAATAGATTGGTCAAGAATCATGCCAGTGGAGCCAGTCAACAACCTTAAAGAATCTGTTAACTATGCTGCGTTGGAGCGTTATAAGTGGCTCATCAATAGGGTTCGATCAAATGGAATGAAGGTGATGCTCACTCTTTTTCATCACTCACTACCACCCTGGGCTGGTGAGTATGGAGGTTGGAAGCTGGAAAAGACAGTGGATTATTTCATGGACTTTACCAGGCTTGTTGTAAACAGTGTATCAGATTTAGTAGACTATTGGGTAACTTTTAATGAGCCCCATGTATTCTGCATGCTAACTTATTGTGCTGGAGCTTGGCCTGGTGGTCACCCTGATATGCTTGAGGCTGCTACTTCTGCACTTCCAACTGGTGTTTTCCAGCAGGCCATGCATTGGATGTCTGTTGCACACTCAAAGGCATATGACTACATCCATGAACTAAGTAACTCATTAAATCCAATAGTCGGTGTAGCACATCATGTGTCATTTATGCGACCCTATGGTCTGTTTGATATTGCTGCTGTTTCCCTGGCTAATTCATTGACTCTCTTCCCATACATTGATGGAATATCTGACAAGCTGGACTTTATAGGCATAAACTACTACGGACAGGAAGTGGTTTCGGGTGCAGGCCTGAAGCTGGTGGAAAACGATGAGTACAGTGAATCTGGTCGTGGGGTATATCCCGATGGCTTATACCGCATGTTGCTTCAGTTCCATGAAAGATATAAACATCTAAACATCCCCTTCATCATTACTGAAAACGGGGTTTCAGATGAGACAGATTTGATCCGCCGTCCATATCTCTTGGAGCATGTGCTTGCTGTTTATGCTGCCATGACCATGGGTGTGCCTGTGCTTGGTTATCTGTTCTGGACTATTTCTGATAATTGGGAGTGGGCTGATGGATATGGTCCCAAGTTTGGGCTTGTTGCAGTTGACCGGGCAAATAATCTTGCACGGATCCCTCGCCCTTCATACCATCTATTTTCTAAAATTGTGACAAGTGGTAAAGTTACTCGTGAAGATCGTGACAGAGCATGGGATGAACTCCAAAGAGCTGCCAAAGAGAAGAAAACAAGGCCATTTTATCGTGCTGTAGATAAACGTCGTTTAATGTATGCAGGTGGACTTGATGAACCTATACAGCGACCTTATATTGAACGAGATTGGCGGTTTGGTCATTATCAGATGGATGGACCCCAAGATCCTTTGAGCCGCTTCTCAAGATTCATTATTCGACCATTCTCCTTTAGAAGGACAACGAAACCACAAAAGAAGAATGCCAAATTAATTCTTCAGCCTCTTGAAACTTAG 1908 0.4596 MTLVGLFVAATKLAGALVTLTVAANAFSFSRFRNKNLRPFRSPIDESSPTVALFNVTEGEDGFFFGLATAPAHVEDRLDDAWIQFAEQKSGEGDGEEGKQRVDAVMGSAGGDGGSHQGASSQVNKGKKPLKVAMEAMIRGFEKYMEVEGQEGEEETRPNVTAWHNVPYPEERLRFWSEPDTELKLAKDTGVTVFRMGIDWSRIMPVEPVNNLKESVNYAALERYKWLINRVRSNGMKVMLTLFHHSLPPWAGEYGGWKLEKTVDYFMDFTRLVVNSVSDLVDYWVTFNEPHVFCMLTYCAGAWPGGHPDMLEAATSALPTGVFQQAMHWMSVAHSKAYDYIHELSNSLNPIVGVAHHVSFMRPYGLFDIAAVSLANSLTLFPYIDGISDKLDFIGINYYGQEVVSGAGLKLVENDEYSESGRGVYPDGLYRMLLQFHERYKHLNIPFIITENGVSDETDLIRRPYLLEHVLAVYAAMTMGVPVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFSKIVTSGKVTREDRDRAWDELQRAAKEKKTRPFYRAVDKRRLMYAGGLDEPIQRPYIERDWRFGHYQMDGPQDPLSRFSRFIIRPFSFRRTTKPQKKNAKLILQPLET* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2341 635 ProSitePatterns Glycosyl hydrolases family 1 active site. 447 455 IPR018120 -
Apr9g2341 635 Gene3D Glycosidases 142 545 - -
Apr9g2341 635 PANTHER GLYCOSYL HYDROLASE 3 592 IPR001360 GO:0004553|GO:0005975
Apr9g2341 635 SUPERFAMILY (Trans)glycosidases 160 538 IPR017853 -
Apr9g2341 635 PRINTS Glycosyl hydrolase family 1 signature 390 404 IPR001360 GO:0004553|GO:0005975
Apr9g2341 635 PRINTS Glycosyl hydrolase family 1 signature 447 455 IPR001360 GO:0004553|GO:0005975
Apr9g2341 635 PRINTS Glycosyl hydrolase family 1 signature 459 470 IPR001360 GO:0004553|GO:0005975
Apr9g2341 635 PRINTS Glycosyl hydrolase family 1 signature 480 497 IPR001360 GO:0004553|GO:0005975
Apr9g2341 635 PRINTS Glycosyl hydrolase family 1 signature 504 516 IPR001360 GO:0004553|GO:0005975
Apr9g2341 635 PANTHER GALACTOLIPID GALACTOSYLTRANSFERASE SFR2, CHLOROPLASTIC 3 592 - -
Apr9g2341 635 MobiDBLite consensus disorder prediction 104 127 - -
Apr9g2341 635 Pfam Glycosyl hydrolase family 1 386 533 IPR001360 GO:0004553|GO:0005975
Apr9g2341 635 Pfam Glycosyl hydrolase family 1 180 365 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2341 Apr-Chr9 31004457 31010138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2341 6 610 Glycoside Hydrolase AT3G06510 63.084 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2341 K21362 - gmx:732645 1101.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2341 9 31004457 31010138 Apr9g2341 9 31004457 31010138 ECH