Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2329 ATGGATTCGGATAGCGGTTCCAAGAATGTGGCGGGGCCTATGCAAATGGATTCCGGTGCTCAAGCAAAAGACAAAGAAAAGGAGGAGCTGGCAGAGAATATGAACAAACTGCATATTGAAGGATCGTCGTCTGGGAATGGATCGCCTAACTTCAGAAGAAAACCGGTTATCATTATAGTTGTAGGAATGGCAGGGAGCGGGAAAACAACACTCCTTCATAGGTTGGTTTGCCATACGCATTTGTCAAACATTAGGGGCTACGTGATGAATCTCGACCCCGCTGTCTTGACACTCCCATATGCCGCTAACATTGATATAAGAGACACTGTTAAGTACAAAGAAGTCATGAAGCAATTCAACCTTGGCCCTAATGGCGGAATCTTGACTTCGTTGAACTTGTTTGCTACCAAGTTTGATGAGGTAATTTCTGTTATTGAGAGACGAGCAGATCAACTTGACTACGTTCTTGTGGATACCCCTGGTCAGATTGAGATATTCACCTGGTCTGCTTCTGGTGCTATCATTACAGAAGCTTTTGCATCCACATTTCCCACTGTAGTCACCTATGTAGTTGATACACCTCGTTCGGAAAATCCCACCACTTTCATGAGCAACATGCTTTATGCTTGTAGTATCCTCTATAAGACAAGGTTGCCTCTTATCTTGGCATTCAACAAGGTTGATGTAGCACAACATCAGTTTGCCTTGGAGTGGATGGAGGACTTTGAAGTATTCCAAGCAGCAGTTAGTTCAGATCACTCGTACACGTCAACTTTAACTCAGAGCCTTTCTCTTGTGCTAGATGAATTCTACAACAATTTAAAATCAGTTGGAGTGTCAGCAGTTTCTGGTGCAGGAATTGAAGCCTTCTTTAAGGCTGTTGAATCCAGTGCAGAGGAATACATGGAAAACTACAAGGCTGATCTTGACAAAAGACGTGAAGAGAAGCAACGCTTAGAAGAAAACCGCAGGAGGGAGAACATGGATAAACTGAGGAGGGACATGGAGAAATCTGGTGGAGAAACTGTAGTCTTGAGCACTGGTTTGAAGGACGAAGAAACAAGTAAAAGTAAAAGCATGATGGATGAGGAAGATGAAGTTGAAGAGGATGAGGAAATGGATGATGATGATGATGATTTGGGGATATATACCGAAGAGGAAGATGCTATAGATCAGGATGAAGATGAGGAGGTTGATAGGTTCGGCTTATGA 1212 0.4315 MDSDSGSKNVAGPMQMDSGAQAKDKEKEELAENMNKLHIEGSSSGNGSPNFRRKPVIIIVVGMAGSGKTTLLHRLVCHTHLSNIRGYVMNLDPAVLTLPYAANIDIRDTVKYKEVMKQFNLGPNGGILTSLNLFATKFDEVISVIERRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRSENPTTFMSNMLYACSILYKTRLPLILAFNKVDVAQHQFALEWMEDFEVFQAAVSSDHSYTSTLTQSLSLVLDEFYNNLKSVGVSAVSGAGIEAFFKAVESSAEEYMENYKADLDKRREEKQRLEENRRRENMDKLRRDMEKSGGETVVLSTGLKDEETSKSKSMMDEEDEVEEDEEMDDDDDDLGIYTEEEDAIDQDEDEEVDRFGL* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2329 403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 296 IPR027417 -
Apr9g2329 403 Coils Coil 302 329 - -
Apr9g2329 403 PANTHER GPN-LOOP GTPASE 18 399 - -
Apr9g2329 403 Coils Coil 20 40 - -
Apr9g2329 403 MobiDBLite consensus disorder prediction 315 403 - -
Apr9g2329 403 MobiDBLite consensus disorder prediction 315 339 - -
Apr9g2329 403 Gene3D - 55 313 IPR027417 -
Apr9g2329 403 CDD GPN1 56 295 - -
Apr9g2329 403 Pfam Conserved hypothetical ATP binding protein 60 298 IPR004130 -
Apr9g2329 403 PANTHER XPA-BINDING PROTEIN 1-RELATED 18 399 IPR004130 -
Apr9g2329 403 MobiDBLite consensus disorder prediction 363 403 - -
Apr9g2329 403 MobiDBLite consensus disorder prediction 1 29 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2329 K24104 - gmx:100797318 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2329 9 30929782 30933080 Apr9g2329 9 30929782 30933080 ECH