Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2322 ATGTGCCCCTCTGGTCGCACCCTCCGTCCTCACGCGCTTTCCTCTGATTTTCGACCCGCATTCGACGTTCTCGACACCGACCGCGACGGAAAAATAAGCCGCGATGACCTCCGTGCCTTCTACTCCGGCGTCCACGGCGGCGTCCCCGGCGGAGACGACGTGATCGGCGCAATGATGACGGTGGCAGACATCAATAAGAACGGGTTCGTGGAGTACGATGAATTTGAGCGCGTGGTGACGGGTAACGCGGAGAGAAGAGCGTTGGGGTGTGGGGCGATGGAGGATGTGTTCAGGGTTATGGACAAAGACGGTGACGGCAAACTCAGCCACCGCGACTTGAAGAGTTACATGGCTTGGGCTGGGTTCCATGCCACCGACGAAGATATCAAAGCCATGATTAGGTTCGGTGGCGGCGATCAAAACGGCGGCGTCACGTTCGATGGTTTGCTTCGTATATTGGCCCTTGATTCTTCCGCTGCTAGTTATTAA 489 0.5685 MCPSGRTLRPHALSSDFRPAFDVLDTDRDGKISRDDLRAFYSGVHGGVPGGDDVIGAMMTVADINKNGFVEYDEFERVVTGNAERRALGCGAMEDVFRVMDKDGDGKLSHRDLKSYMAWAGFHATDEDIKAMIRFGGGDQNGGVTFDGLLRILALDSSAASY* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2322 162 ProSiteProfiles EF-hand calcium-binding domain profile. 93 123 IPR002048 GO:0005509
Apr9g2322 162 ProSitePatterns EF-hand calcium-binding domain. 101 113 IPR018247 -
Apr9g2322 162 ProSiteProfiles EF-hand calcium-binding domain profile. 12 47 IPR002048 GO:0005509
Apr9g2322 162 SMART efh_1 128 156 IPR002048 GO:0005509
Apr9g2322 162 SMART efh_1 54 82 IPR002048 GO:0005509
Apr9g2322 162 SMART efh_1 16 44 IPR002048 GO:0005509
Apr9g2322 162 SMART efh_1 92 120 IPR002048 GO:0005509
Apr9g2322 162 Pfam EF hand 93 114 IPR002048 GO:0005509
Apr9g2322 162 ProSitePatterns EF-hand calcium-binding domain. 63 75 IPR018247 -
Apr9g2322 162 ProSiteProfiles EF-hand calcium-binding domain profile. 50 85 IPR002048 GO:0005509
Apr9g2322 162 PANTHER CALCIUM BINDING PROTEIN 1 157 - -
Apr9g2322 162 Pfam EF-hand domain pair 17 79 IPR002048 GO:0005509
Apr9g2322 162 Gene3D - 8 160 - -
Apr9g2322 162 CDD EFh 16 80 IPR002048 GO:0005509
Apr9g2322 162 CDD EFh 94 154 IPR002048 GO:0005509
Apr9g2322 162 ProSitePatterns EF-hand calcium-binding domain. 25 37 IPR018247 -
Apr9g2322 162 PANTHER CALMODULIN-RELATED PROTEIN 97A-LIKE 1 157 - -
Apr9g2322 162 SUPERFAMILY EF-hand 16 153 IPR011992 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2322 1 153 EF-hand Containing Proteins AT5G49480 56.329 1.43e-56 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2322 K02183 - gmx:100527230 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2322 9 30857254 30858165 Apr9g2322 9 30857254 30858165 ECH