Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2318 ATGTGCAAGAAGAATGCTTTCCCCCGTTTTGAAGTAGTTTCAGATGAAACAGATCATTTCTTTGCCCGATCATCAGCCCATGAACCATCCATAACCACCGATCCAAGGAGCGTATTGAACAAGACGGTGATGAAAGAATGGAAAATGTTGGAGCAAGACCTACCTGAATCCATTTACGTTCGAGTCTACGAACGACGCATAGATCTAATGCGAGCTGTGATTATAGGTGCTGCTGGCACACCATATGAAAATGGTCTCTTTTTCTTCGATATCATGTTTCCTAGTGAATACCCTAAACAACCACCCCTTCTTCATTTTCACTCATTTGGATTGAGACTCAACCCCAATCTCTATTGCAGCGGCAAAGTTTGTTTGAGTCTCCTCAACACCTGGTCTGGTAGGAAGAGTGAAAAGTGGGATCCATCTCGTTCCACCATGCTTCAAGTGTTACTCTCAATTCAAGGACTTGTTCTCAACGAAAAGCCATTCTTTAACGAACCCGGTGCTGATGCTTTCAGGCTTTTTATACTGGAGAGGAAGTCACGCGCCTACAACGAGAACGTGTTTGGGCTTACTTGTAACATTTCCATTCATCTGCTTCGGAAGCCCCCTAAGTACTTTGAAACCTTCGTCAAAAACCACTTTCGTGAGCGAGCGCGTGTTATTCTCGGGCTCTGTGTCAGGTACGAGAATGGGAGCGTGGGCGTCGGGAATCACTCTCGCGGGGGGCATTCGTCTACGGTGGAAGTTTCGAAGGAGCTCAAGGAGTGGATGAACTCATCTTTCCCTCGACTTGTTCAAGCGTTTCGACAAAACGACCCTTCCTTAGGACTTTTTATTGAACAATTAGAGTCGCAAAGGAAGCAATATGAAAACTACAGCTGCGGACAAAAGGAGCAATCTGAAAACAATGGCGGTGGAATCTTGAGGAAGGCCTTCGAAAGGATCAAAATGGCTTTGGGGTGGAAGAAAGTAGAGAGAAAGAAAACCAGCGCCGTGGAAAGGAAAAACCGCAGTCTTCAACGTGCTTGA 1032 0.4583 MCKKNAFPRFEVVSDETDHFFARSSAHEPSITTDPRSVLNKTVMKEWKMLEQDLPESIYVRVYERRIDLMRAVIIGAAGTPYENGLFFFDIMFPSEYPKQPPLLHFHSFGLRLNPNLYCSGKVCLSLLNTWSGRKSEKWDPSRSTMLQVLLSIQGLVLNEKPFFNEPGADAFRLFILERKSRAYNENVFGLTCNISIHLLRKPPKYFETFVKNHFRERARVILGLCVRYENGSVGVGNHSRGGHSSTVEVSKELKEWMNSSFPRLVQAFRQNDPSLGLFIEQLESQRKQYENYSCGQKEQSENNGGGILRKAFERIKMALGWKKVERKKTSAVERKNRSLQRA* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2318 343 CDD UBCc 41 192 IPR000608 -
Apr9g2318 343 SMART ubc_7 41 197 - -
Apr9g2318 343 Pfam Ubiquitin-conjugating enzyme 43 188 IPR000608 -
Apr9g2318 343 Gene3D Ubiquitin Conjugating Enzyme 1 273 IPR016135 -
Apr9g2318 343 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 38-RELATED 3 298 - -
Apr9g2318 343 SUPERFAMILY UBC-like 32 204 IPR016135 -
Apr9g2318 343 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 3 298 - -
Apr9g2318 343 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 38 197 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2318 Apr-Chr9 30827189 30828220 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2318 7 271 Miscellaneous Gene Families AT2G33770 49.248 7.66e-74 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2318 K10581 - gmx:100810844 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2318 9 30827189 30828220 Apr9g2318 9 30827189 30828220 ECH