Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2306 ATGAAGAAAAAAAGGAGTAGGGTATCACGTAGACCTCGGGCTAATGCTGATGCACTATTTCAGTGTTATTTTGGTTGGGTGCCACTTGAAGAACCTTTTGGAAAGCAAGATGAGAATGAGAAAATGAGGGATACAATGGTTGCTTCTGGTGGATTAAGAACTGGCAACAAGCCAAAGAAGCTAAAGCTCAAGCTTGGGGGTGTTACTCATACTATTCATACCAAGTCAAAGACAGAAACTGGCTTCAGCGGTGGTTCTTTTGTAACAAACTTTTCTGAGGGTCCTAAGCCTCAGGATGATACAAATGGTAATGATGCTTGTTCTTTTGATAAAAGGAGAGGCCTTGGTGACGCATCGCTAAAGCCCTCTAGAACCGAATCTGGTTTTACAGCAGAGAATCATTCTCATAGAGGAAAGAGAACTGAGCAAAGTGTAAATGTCATCCATGAGCGTGTCCACAAGAGCAAGCGTATTACTAGAAAAGGTGCCTTGAGTGTGGGATTTAGTGATGAGGATAATGAAGATGCAGAACTTCATTATCGTGAAACATCCCATGCCTCAAAACAAGCTGTTAGTCGCCGCAGAGATGATTGTAGAAGTTCAACAGTACCTGGCAAATTTTATGTTGCACAGAGAAGTCAGATTGATGATCTCATAGACCTTGGAACACCAGGGTCAATTGAAGATGGTAAGAAGAAATTGAACTTGGAGAAGAAATCTGATGATTGGGACTATGTGGAAGAAGATCCAACATCAAGTGATGAATCAGAGTCAGAGAGAAAAATGTCAAAGAGGGAGTCTGTTCATTTATTTGTCCAAGGAAAAGAAGGCACCATCATTAATCGAAATTGTTCAGTTGACTCATTCAAAGATGTTTTATCTAGCATTGTCGACATCTCAGATGATTCGGTTCCCACAGTGTCTAAAAGGAAAAGGGGCAAATTGTCAGAAATGGAGCTGCAACTAAAGAAAGCTGAGGCTGCACAGAGACGTAAAATTCAATCAGAGAAGGCAGCTAGGGATGCTGAGGCGGCCGCCATCAGGAAGATACTTGGTCAAGAATCTGGTAGGAAGAAGAAACAGGAAAAGATGAATAAGCGCAGAGATGAATTTGCTAAGGAAAAATCTACCAACACCCTCATTTTAGGATCAAATACTGTTCGATGGACTATGGGTCCCCAAGGAACAGTAGTGACTTTTTCCGAAGATATTGGTTTACCCAGTATCTTCCAAATGATACGTAGCAGCTATCCACCCCCCAGAGAAAAATGCGCAGGTCCAAACTGCACGAATGTATACAAGTATCGGGATTCTAAGTCAAAGCTTCCTCTCTGTAGTCTTGGTTGTTTCAAAGCAATACGCGAGAAGATCCAACATGTGGTTGCATGCTAG 1392 0.4195 MKKKRSRVSRRPRANADALFQCYFGWVPLEEPFGKQDENEKMRDTMVASGGLRTGNKPKKLKLKLGGVTHTIHTKSKTETGFSGGSFVTNFSEGPKPQDDTNGNDACSFDKRRGLGDASLKPSRTESGFTAENHSHRGKRTEQSVNVIHERVHKSKRITRKGALSVGFSDEDNEDAELHYRETSHASKQAVSRRRDDCRSSTVPGKFYVAQRSQIDDLIDLGTPGSIEDGKKKLNLEKKSDDWDYVEEDPTSSDESESERKMSKRESVHLFVQGKEGTIINRNCSVDSFKDVLSSIVDISDDSVPTVSKRKRGKLSEMELQLKKAEAAQRRKIQSEKAARDAEAAAIRKILGQESGRKKKQEKMNKRRDEFAKEKSTNTLILGSNTVRWTMGPQGTVVTFSEDIGLPSIFQMIRSSYPPPREKCAGPNCTNVYKYRDSKSKLPLCSLGCFKAIREKIQHVVAC* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2306 463 Coils Coil 308 345 - -
Apr9g2306 463 Pfam HIT zinc finger 420 451 IPR007529 -
Apr9g2306 463 MobiDBLite consensus disorder prediction 105 119 - -
Apr9g2306 463 PANTHER INO80 COMPLEX SUBUNIT B 1 463 IPR029523 GO:0006338|GO:0031011
Apr9g2306 463 MobiDBLite consensus disorder prediction 182 201 - -
Apr9g2306 463 MobiDBLite consensus disorder prediction 76 104 - -
Apr9g2306 463 Pfam PAPA-1-like conserved region 319 403 IPR006880 GO:0031011
Apr9g2306 463 MobiDBLite consensus disorder prediction 244 265 - -
Apr9g2306 463 SMART PAPA_1_2 319 404 IPR006880 GO:0031011
Apr9g2306 463 PANTHER PAPA-1-LIKE FAMILY PROTEIN / ZINC FINGER (HIT TYPE) FAMILY PROTEIN 1 463 - -
Apr9g2306 463 MobiDBLite consensus disorder prediction 76 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2306 Apr-Chr9 30734925 30739403 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2306 - - aprc:113846788 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2306 9 30734925 30739403 Apr9g2306 9 30734925 30739403 ECH