Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1930 ATGAACCAAACACCACTCGTTCTGTCTCTCTTCCTCTTAGTTCTTTCTATCACTGCAAACGCTCACAACATTACTCGCATACTTGCCAAGCACCCTGGTTTCTCCACCTTCAACCACTACCTCACCGTCACCCACCTCGCCGCCGAGATAAACCGCCGCGAGACCATCACCGTCCTCGCCATCGACAATGCAGCCATGGCCACCCTCCTCGACAAACACCTCTCCATCCCCACTCTCAAAAATGTTCTCTCTCTCCACGTCTTGGTTGACTACTTCGGCGCCAGAAAGCTTCACCAAATCACCAAAGGCACCACCCTCGCTTCTTCCATGTTCCAGGCCACAGGCGCCGCCGCTGGCACCGCCGGTTACGTCAACATCACCAACCTCAAAGGTGGCAAAGTGGGGTTCGCAGCAGAAGACAACGACGGCCAACTCCATTCGTTCTACGTCAAATCCGTTCAAGAAATCCCATTCAACATCTCCGTTTTGCAGATTAGTGAAGCCTTGAGTTCTGCTGACGCAGAAGCACCAACCGCAGCACCAAGCGCCATAGACCTCATCTCTATCATGTCCAAACAAGGTTGCAAGGCCTTCGCAGACTTGTTGAGGGTTTCCAAAGCTCTTCCAACTTTTAAGGAAAACGTTGACGGCGGTTTAACCGTTTTCTGCCCCACCGACAGCGCCGTCAGCGGTTTCACTTCCAAGTACAAGAATCTCACCGACGCTCAGAAGGTGTCCTTGCTGTTATATCACGGCGTTCCCGTTTACCAGTCCATGCAAATGTTGAAGTCCAATAACGGGGTAATGAACACTTTGGCTACTGAAGGAGCTAACAAGTACGATTTCACGGTTCAAAATGATGGGGAAGATGTGATGCTGGAAACCAAAGTCGACACTGCAAGTATCGTTGGAACTTTGATAGATCAAGACCCTTTTGTAGCTTATAAGATAAGCAAGGTTTTGATGCCAAGAGAGTTATTTAAGGAGAGTGAAGCACCTGCTGAGTCACCAAAGGCATCGAAGAAGAGCACCAAGAAGGGAAAGGCAAATTCAGAGGCTGCAGATGCACCCGCAGATGGACCATCATCAGAAGCTGATGATCAAAAAGCTGCTGATGATAACAATGGGGTAAGTAGATTGCCCAATGGGCTCCGATTGGTGATGGTGTTGTTGAGTTTGGTTATGGGGCTTTTGGTTCTATGA 1203 0.4954 MNQTPLVLSLFLLVLSITANAHNITRILAKHPGFSTFNHYLTVTHLAAEINRRETITVLAIDNAAMATLLDKHLSIPTLKNVLSLHVLVDYFGARKLHQITKGTTLASSMFQATGAAAGTAGYVNITNLKGGKVGFAAEDNDGQLHSFYVKSVQEIPFNISVLQISEALSSADAEAPTAAPSAIDLISIMSKQGCKAFADLLRVSKALPTFKENVDGGLTVFCPTDSAVSGFTSKYKNLTDAQKVSLLLYHGVPVYQSMQMLKSNNGVMNTLATEGANKYDFTVQNDGEDVMLETKVDTASIVGTLIDQDPFVAYKISKVLMPRELFKESEAPAESPKASKKSTKKGKANSEAADAPADGPSSEADDQKAADDNNGVSRLPNGLRLVMVLLSLVMGLLVL* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1930 400 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6 396 IPR033254 -
Apr9g1930 400 Pfam Fasciclin domain 33 110 IPR000782 -
Apr9g1930 400 Pfam Fasciclin domain 195 323 IPR000782 -
Apr9g1930 400 Gene3D FAS1 domain 186 323 IPR036378 -
Apr9g1930 400 Gene3D FAS1 domain 20 160 IPR036378 -
Apr9g1930 400 MobiDBLite consensus disorder prediction 329 377 - -
Apr9g1930 400 SUPERFAMILY FAS1 domain 180 324 IPR036378 -
Apr9g1930 400 MobiDBLite consensus disorder prediction 329 349 - -
Apr9g1930 400 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 2 6 396 - -
Apr9g1930 400 SUPERFAMILY FAS1 domain 27 168 IPR036378 -
Apr9g1930 400 ProSiteProfiles FAS1/BIgH3 domain profile. 182 321 IPR000782 -
Apr9g1930 400 ProSiteProfiles FAS1/BIgH3 domain profile. 21 169 IPR000782 -
Apr9g1930 400 SMART fasc_3 220 324 IPR000782 -
Apr9g1930 400 SMART fasc_3 57 172 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1930 Apr-Chr9 27785132 27786612 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1930 - - gmx:100805178 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1930 9 27785132 27786612 Apr9g1930 9 27785132 27786612 ECH