Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1895 ATGCACAGACTTTCTTGCCGCTCCTCCTCCGTCTCCGCCGTACTGCGCTACGGCGGCGCACTTCGCCGGGACGTGGTTGCTCCGCTTTCCTCTTCTCACTCCGCTACGGTCGGTGAGAATGATTCCAAAGCCAGATGGTTTTCTTTCCTCAGTTCGGAGAAATCAAGCGTGACTAAATCCACAGATCAGGAAAATTCTAAAAGAGATTTGTTCTTTGGCAAACGGTATGAATCAACTGCTGCAGAATCTTCTTCATCAAGTTCTCCACCTGCTGAGAGATATGAGTACCAAGCAGAGGTTAGTCGACTCATGGACCTCATTGTTAACAGTTTATACAGTAACAAGGAGGTGTTTCTTAGGGAACTTATCAGTAATGCAAGTGATGCCTTGGATAAGCTGCGATTTCTGAGTGTAACAGAGCCTGAACTGTTGAAGGATGCAGTTGATTTTGATATCCGAATTGAAGCTGATAAAGATAATGGGATTATCAGTATTACTGATACAGGCATCGGTATGACAAGGCAAGAACTAGTTGATTGTCTTGGAACTATTGCTCAAAGTGGAACTGCAAAGTTTTTGAAAGCTCTAAAGGATAGCAAGGATGCTGGAGGTGACAACAACTTAATTGGTCAATTTGGTGTGGGATTCTACTCTGCTTTTCTGGTTGCTGATCGGGTGGTCGTCTCTACCAAGAGTCCAAAATCTGATAAACAATATGTTTGGGAAGGAGAGGCAAATGCAAGCTCATATACCATATCTGAGGAGACAGATCCTGATAAGCTGATTCCAAGAGGAACTCGCCTTACACTATATCTTAAGAGGGATGACAAAGGTTTTGCTCATCCAGAGCGGATTGAGAAGCTTGTGAAAAACTATTCCCAATTTGTCTCATTCCCAATATACACTTGGCAGGAAAAGGGATTCACCAAAGAGGTGGAAGTTGATGAGGATCCAGCTGAGGCCAAAAAGGATGAGAAAGATGAAAAGACTGAGAAAAAGAAAAAAACTAAGACTGTTGTTGAGAAGTACTGGGATTGGGAGCTGATAAATGAGACCCAACCAATATGGCTTCGTAATCCTAAAGAAGTCACCAAAGAGGAGTACAACGAATTCTACAAGAAAACATTTAATGAATATCTGGAGCCATTAGCATCGTCACACTTTACCACAGAGGGTGAAGTAGAATTTAGATCAATACTTTATGTTCCTGCCTTTGCTCCCTCAGGGAAAGATGACATAATCAATCCCAAGACCAAGAATATAAGACTTTATGTGAAGAGAGTGTTCATTTCTGATGACTTTGATGGAGAACTGTTCCCCCGATACTTGAGCTTTGTCAAAGGTGTGGTTGACTCAAATGACCTTCCACTCAATGTGTCACGTGAAATTCTTCAAGAGAGCCGAATAGTGAGGATTATGCGGAAACGTTTAGTTCGAAAATCTTTTGACATGATTTTGGGGATATCCATGAGTGAGAACAGAGAGGACTATGAGAAGTTCTGGGAGAACTTTGGCAAACACCTGAAATTGGGTTGCATTGAGGACCGTGAGAATCACAAACGTATTGCTCCATTGCTTAGGTTTTTCTCATCCCAAAGTGAAGAAGAACTGATCAGCTTGGATGAATATGTGGAGAACATGAAACCTGATCAAAAGGATATTTATTACATTGCTGCTGACAGCGTGACTAGTGCAAAGAACACACCTTTCTTGGAGAGACTCATGGAGAAGGATCTTGAAGTTCTGTTTTTGGTGGATCCCATCGATGAGGTGGCTGTTCAAAACCTTAAATCATACAAAGAAAAGAATTTTGTTGACATTAGCAAGGAAGACTTGGATCTAGGTGATAAGAATGAGGAAAAGGAAAAGGAGATGAAGCAGGAATTTGGCCAAACATGTGACTGGATTAAGAAACGTTTGGGAGATAAGGTTGCAAGTGTGCAAATTTCAAACCGACTTAGCTCTTCACCTTGTGTTCTGGTGTCTGGAAAATTTGGTTGGTCTGCTAACATGGAAAGGCTCATGAAGGCACAAACCATGGGTGATGCCTCTAGTTTGGAGTTCATGAGGAGCAGAAGGGTGTTTGAGATAAACCCTGACCACCCTATTATCAGGAACCTGGATGCTGCTTACAAAACAAATCCAGAGGATCAAGATGCCCTCAGAGCTATCGATCTTTTGTATGATGCAGCTTTGGTTTCCAGTGGTTTTACGCCGGATAATCCAGCACAACTTGGAGGAAAGATATACGAGATGATGGGTATGGCTCTCACCGGTAAATGGTCAACTCCTGGTCAGTTTCAGTCCACTGTAATCCAACCCCATGCCCCAGAAACTGTAGAAGCTGAGGTGGTTGAACCTACTGAGGCTGGCGGACATAAGTGA 2385 0.4277 MHRLSCRSSSVSAVLRYGGALRRDVVAPLSSSHSATVGENDSKARWFSFLSSEKSSVTKSTDQENSKRDLFFGKRYESTAAESSSSSSPPAERYEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTEPELLKDAVDFDIRIEADKDNGIISITDTGIGMTRQELVDCLGTIAQSGTAKFLKALKDSKDAGGDNNLIGQFGVGFYSAFLVADRVVVSTKSPKSDKQYVWEGEANASSYTISEETDPDKLIPRGTRLTLYLKRDDKGFAHPERIEKLVKNYSQFVSFPIYTWQEKGFTKEVEVDEDPAEAKKDEKDEKTEKKKKTKTVVEKYWDWELINETQPIWLRNPKEVTKEEYNEFYKKTFNEYLEPLASSHFTTEGEVEFRSILYVPAFAPSGKDDIINPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKSFDMILGISMSENREDYEKFWENFGKHLKLGCIEDRENHKRIAPLLRFFSSQSEEELISLDEYVENMKPDQKDIYYIAADSVTSAKNTPFLERLMEKDLEVLFLVDPIDEVAVQNLKSYKEKNFVDISKEDLDLGDKNEEKEKEMKQEFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSGKFGWSANMERLMKAQTMGDASSLEFMRSRRVFEINPDHPIIRNLDAAYKTNPEDQDALRAIDLLYDAALVSSGFTPDNPAQLGGKIYEMMGMALTGKWSTPGQFQSTVIQPHAPETVEAEVVEPTEAGGHK* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1895 794 PIRSF HSP90_HTPG 51 785 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Apr9g1895 794 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 114 274 IPR003594 -
Apr9g1895 794 Gene3D - 350 522 - -
Apr9g1895 794 Pfam Hsp90 protein 279 759 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Apr9g1895 794 Gene3D - 610 757 IPR037196 -
Apr9g1895 794 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 92 306 IPR036890 -
Apr9g1895 794 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 30 791 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Apr9g1895 794 SUPERFAMILY HSP90 C-terminal domain 633 753 IPR037196 -
Apr9g1895 794 Gene3D - 78 319 IPR036890 -
Apr9g1895 794 CDD HATPase_Hsp90-like 101 296 - -
Apr9g1895 794 PRINTS 90kDa heat shock protein signature 92 112 IPR020575 -
Apr9g1895 794 PRINTS 90kDa heat shock protein signature 113 135 IPR020575 -
Apr9g1895 794 PRINTS 90kDa heat shock protein signature 162 179 IPR020575 -
Apr9g1895 794 PRINTS 90kDa heat shock protein signature 180 197 IPR020575 -
Apr9g1895 794 PRINTS 90kDa heat shock protein signature 209 231 IPR020575 -
Apr9g1895 794 PRINTS 90kDa heat shock protein signature 264 281 IPR020575 -
Apr9g1895 794 PRINTS 90kDa heat shock protein signature 282 300 IPR020575 -
Apr9g1895 794 SUPERFAMILY Ribosomal protein S5 domain 2-like 352 610 IPR020568 -
Apr9g1895 794 Hamap Chaperone protein HtpG [htpG]. 89 754 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Apr9g1895 794 ProSitePatterns Heat shock hsp90 proteins family signature. 112 121 IPR019805 GO:0005524|GO:0006457|GO:0051082
Apr9g1895 794 Gene3D - 523 609 - -
Apr9g1895 794 PANTHER BNAA05G29880D PROTEIN 30 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1895 Apr-Chr9 27571972 27577339 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1895 K09487 - gmx:100806710 1364.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1895 9 27571972 27577339 Apr9g1895 9 27571972 27577339 ECH